Pre_GI: BLASTP Hits

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Query: NC_013716:4824541:4846903 Citrobacter rodentium ICC168, complete genome

Start: 4846903, End: 4847403, Length: 501

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:6013242:601943360194336019855423Hahella chejuensis KCTC 2396, complete genomeStringent starvation protein B5e-33140
NC_015740:1017000:103672610367261037133408Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeClpXP protease specificity-enhancing factor3e-30130
NC_012560:1260031:127349312734931273900408Azotobacter vinelandii DJ, complete genomeStringent starvation protein B2e-29128
NC_021150:1258780:127350512735051273912408Azotobacter vinelandii CA6, complete genomeClpXP protease specificity-enhancing factor2e-29128
NC_015563:1240978:126062812606281261164537Delftia sp. Cs1-4 chromosome, complete genomeStringent starvation protein B6e-26116
NC_012724:359444:366288366288366806519Burkholderia glumae BGR1 chromosome 1, complete genomeStringent starvation protein B1e-25115
NC_010002:6104500:610451161045116105041531Delftia acidovorans SPH-1, complete genomeStringent starvation protein B9e-26115
NC_015381:429940:437236437236437736501Burkholderia gladioli BSR3 chromosome 1, complete sequencestringent starvation protein B3e-25114
NC_015856:764651:767565767565768119555Collimonas fungivorans Ter331 chromosome, complete genomestringent starvation protein B8e-24109
NC_014323:4619344:464229846422984642795498Herbaspirillum seropedicae SmR1 chromosome, complete genomestringent starvation B protein2e-23108
NC_009074:3559211:357406735740673574588522Burkholderia pseudomallei 668 chromosome I, complete sequencestringent starvation protein B5e-23107
NC_011992:773905:784213784213784740528Acidovorax ebreus TPSY, complete genomeStringent starvation protein B5e-23107
NC_010508:451184:458508458508459029522Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceStringent starvation protein B6e-23106
NC_008060:2913671:293561729356172936138522Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceStringent starvation protein B7e-23106
NC_008542:483761:490507490507491028522Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceStringent starvation protein B7e-23106
NC_006350:3710641:372495637249563725513558Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative stringent starvation protein B8e-23106
NC_015731:3274739:329481932948193295247429Nitrosomonas sp. Is79A3 chromosome, complete genomeStringent starvation protein B1e-21102
NC_014307:533975:541820541820542317498Ralstonia solanacearum CFBP2957 chromosome, complete genomestringent starvation protein b, clpxp protease specificity-enhancing factor2e-2097.8
NC_010682:3313944:335125433512543351751498Ralstonia pickettii 12J chromosome 1, complete sequenceStringent starvation protein B3e-2097.8
NC_012856:3000839:301269730126973013194498Ralstonia pickettii 12D chromosome 1, complete genomeStringent starvation protein B3e-2097.8