Pre_GI: BLASTP Hits

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Query: NC_013716:4824541:4828072 Citrobacter rodentium ICC168, complete genome

Start: 4828072, End: 4828344, Length: 273

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:1729922:174869117486911748972282Yersinia pestis A1122 chromosome, complete genomeputative ribonuclease inhibitor1e-1271.6
NC_009708:483253:502207502207502488282Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebarstar1e-1271.6
NC_009381:321577:340347340347340628282Yersinia pestis Pestoides F chromosome, complete genomeribonuclease inhibitor1e-1271.6
NC_003143:4105754:412452341245234124804282Yersinia pestis CO92, complete genomeputative ribonuclease inhibitor1e-1271.6
NC_008150:4140804:415956341595634159844282Yersinia pestis Antiqua, complete genomeputative ribonuclease inhibitor1e-1271.6