Pre_GI: BLASTP Hits

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Query: NC_013716:4824541:4824541 Citrobacter rodentium ICC168, complete genome

Start: 4824541, End: 4826508, Length: 1968

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4171500:4172122417212241740771956Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,p-hydroxybenzoic acid efflux pump subunit AaeB0821
NC_003143:4105754:4120160412016041221151956Yersinia pestis CO92, complete genomehypothetical protein0821
NC_010465:522649:5370355370355389901956Yersinia pseudotuberculosis YPIII, complete genomeFusaric acid resistance protein conserved region0821
NC_008149:3966586:3967986396798639699411956Yersinia pestis Nepal516, complete genomemembrane protein0821
NC_006155:4210606:4212342421234242142971956Yersinia pseudotuberculosis IP 32953, complete genomeputative Efflux Transporter (PET) family protein0821
NC_008150:4140804:4155200415520041571551956Yersinia pestis Antiqua, complete genomehypothetical protein0821
NC_005810:4381182:4382917438291743848721956Yersinia pestis biovar Microtus str. 91001, complete genomep-hydroxybenzoic acid efflux subunit AaeB0821
NC_004088:179775:1811751811751831301956Yersinia pestis KIM, complete genomehypothetical protein0821
NC_010159:1208699:1210440121044012123951956Yersinia pestis Angola, complete genomep-hydroxybenzoic acid efflux pump subunit AaeB0821
NC_017168:1729922:1744328174432817462831956Yersinia pestis A1122 chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeB0821
NC_017154:3997810:4012216401221640141711956Yersinia pestis D106004 chromosome, complete genomehypothetical protein0821
NC_014029:4057696:4072102407210240740571956Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0821
NC_009708:483253:4978434978434997981956Yersinia pseudotuberculosis IP 31758 chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeB0821
NC_009381:321577:3359843359843379391956Yersinia pestis Pestoides F chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeB0821
NC_010634:4150763:4152499415249941544541956Yersinia pseudotuberculosis PB1/+, complete genomefusaric acid resistance protein region0821
NC_017160:3986844:3988244398824439901991956Yersinia pestis D182038 chromosome, complete genomemembrane protein0817
NC_015224:4028150:4028150402815040301051956Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,p-hydroxybenzoic acid efflux subunit AaeB0806
NC_010501:1286971:1287225128722512892552031Pseudomonas putida W619, complete genomeFusaric acid resistance protein conserved region3e-28127
NC_007498:3399478:3397301339730133994812181Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein5e-25116
NC_004578:4061372:4080432408043240824982067Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein8e-2099.4
NC_014722:1084616:1105620110562011078272208Burkholderia rhizoxinica HKI 454, complete genomefusaric acid resistance protein fusB / fusaric acid resistance protein fusC / fusaric acid resistance9e-2099
NC_014837:1873020:1875112187511218771122001Pantoea sp. At-9b chromosome, complete genomefusaric acid resistance protein5e-1790.1
NC_010676:897801:9111649111649133322169Burkholderia phytofirmans PsJN chromosome 2, complete sequenceFusaric acid resistance protein conserved region1e-1688.6
NC_016901:5130147:5164668516466851667402073Shewanella baltica OS678 chromosome, complete genomefusaric acid resistance protein5e-1687
NC_009997:5188221:5224046522404652261182073Shewanella baltica OS195, complete genomeFusaric acid resistance protein conserved region5e-1687
NC_011663:5016488:5034333503433350364052073Shewanella baltica OS223 chromosome, complete genomefusaric acid resistance protein8e-1685.9
NC_009665:5072413:5108133510813351102682136Shewanella baltica OS185 chromosome, complete genomefusaric acid resistance protein region1e-1585.5
NC_012988:4353000:4368982436898243710122031Methylobacterium extorquens DM4, complete genomeefflux transporter permease, aromatic acid exporter family5e-1583.6
NC_011000:1262324:1284579128457912867742196Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative fusaric acid resistance transporter protein5e-1583.6
NC_014306:4376012:4377292437729243793642073Erwinia billingiae Eb661, complete genomePutative fusaric acid resistance protein1e-1482
NC_016027:376669:3770913770913790912001Gluconacetobacter xylinus NBRC 3288, complete genomefusaric acid resistance protein2e-1481.6
NC_015138:2069739:2094280209428020964242145Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeFusaric acid resistance protein conserved region3e-1480.9
NC_011979:773673:7933787933787953451968Geobacter sp. FRC-32, complete genomeFusaric acid resistance protein conserved region1e-1379
NC_010125:763141:7803597803597824312073Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein2e-1378.2
NC_021066:1712905:1756689175668917585961908Raoultella ornithinolytica B6, complete genomefusaric acid resistance domain protein4e-1377.4
NC_010943:2815865:2833090283309028350601971Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane fusaric acid resistance efflux protein1e-1275.5
NC_011365:1969198:2000256200025620024842229Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomefusaric acid resistance protein2e-1274.7
NC_013209:2248119:2289027228902722908621836Acetobacter pasteurianus IFO 3283-01, complete genomefusaric acid resistance protein5e-1170.1
NC_014562:1402863:1417694141769414197392046Pantoea vagans C9-1 chromosome, complete genomeputative ArAE family transporter3e-1067.8
NC_017075:1970168:1970168197016819721802013Rubrivivax gelatinosus IL144, complete genomehypothetical protein1e-0965.5
NC_017249:263873:2714922714922734561965Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-0963.2