Pre_GI: BLASTP Hits

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Query: NC_013716:4728500:4745004 Citrobacter rodentium ICC168, complete genome

Start: 4745004, End: 4745492, Length: 489

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:362548:374301374301374759459Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetype II secretory pathway, component PulM2e-0651.2
NC_015061:366552:366552366552367010459Rahnella sp. Y9602 chromosome, complete genomeGeneral secretion pathway M protein5e-0650.4