Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:4728500:4744244 Citrobacter rodentium ICC168, complete genome

Start: 4744244, End: 4745017, Length: 774

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:362548:373450373450374283834Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeprepilin signal peptidase PulO-like peptidase2e-36152
NC_010501:4989455:500955750095575010423867Pseudomonas putida W619, complete genomePrepilin peptidase3e-35149
NC_015733:715947:716570716570717421852Pseudomonas putida S16 chromosome, complete genomeprepilin peptidase3e-35148
NC_002947:737924:738547738547739413867Pseudomonas putida KT2440, complete genometype IV pili prepilin peptidase PilD/XcpA8e-35147
NC_017986:3407913:341082434108243411690867Pseudomonas putida ND6 chromosome, complete genomeprepilin peptidase1e-34146
NC_009512:755658:757888757888758754867Pseudomonas putida F1, complete genomePrepilin peptidase8e-34144
NC_011750:3584000:361122736112273612036810Escherichia coli IAI39 chromosome, complete genomebifunctional prepilin leader peptidase and methylase1e-33143
NC_011742:3277941:330489633048963305705810Escherichia coli S88 chromosome, complete genomebifunctional prepilin leader peptidase and methylase3e-33142
NC_012967:3012317:304047730404773041286810Escherichia coli B str. REL606 chromosome, complete genomebifunctional prepilin leader peptidase/ methylase2e-33142
NC_008253:3161311:320832832083283209137810Escherichia coli 536, complete genomeputative prepilin peptidase5e-33141
NC_011751:3530954:356333335633333564142810Escherichia coli UMN026 chromosome, complete genomebifunctional prepilin leader peptidase and methylase5e-33141
NC_010995:3197686:321343832134383214364927Cellvibrio japonicus Ueda107, complete genometype IV pilus prepilin peptidase PilD1e-32140
NC_010322:768849:771291771291772157867Pseudomonas putida GB-1 chromosome, complete genomeprepilin peptidase2e-31135
NC_018868:3943088:394893539489353949663729Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometype IV pilus prepilin peptidase PilD7e-31134
NC_008027:4953432:496994349699434970809867Pseudomonas entomophila L48, complete genometype IV pili prepilin peptidase PilD/XcpA3e-30132
NC_015947:3539472:354729535472953548158864Burkholderia sp. JV3 chromosome, complete genomePrepilin peptidase6e-30130
NC_011901:837085:844532844532845398867Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype IV pilus prepilin peptidase PilD2e-29129
NC_015740:1017000:102701110270111027880870Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype 4 prepilin peptidase PilD3e-29129
NC_015410:969526:974731974731975582852Pseudomonas mendocina NK-01 chromosome, complete genomeprepilin peptidase5e-29128
NC_014618:1040381:106162210616221062443822Enterobacter cloacae SCF1 chromosome, complete genomeprepilin peptidase1e-28127
NC_011071:3544450:356089835608983561761864Stenotrophomonas maltophilia R551-3, complete genomePrepilin peptidase1e-28127
NC_009434:1156834:116750211675021168371870Pseudomonas stutzeri A1501, complete genometype 4 prepilin peptidase PilD9e-29127
NC_014910:966761:971083971083971961879Alicycliphilus denitrificans BC chromosome, complete genomeprepilin peptidase1e-28126
NC_015422:910292:912461912461913339879Alicycliphilus denitrificans K601 chromosome, complete genomePrepilin peptidase1e-28126
NC_015556:4074367:409481540948154095687873Pseudomonas fulva 12-X chromosome, complete genomePrepilin peptidase3e-28125
NC_009665:4675289:469174446917444692670927Shewanella baltica OS185 chromosome, complete genomeprepilin peptidase3e-28125
NC_009074:3409849:343653634365363437450915Burkholderia pseudomallei 668 chromosome I, complete sequencetype IV prepilin leader peptidase3e-28125
NC_008740:2989856:300525330052533006128876Marinobacter aquaeolei VT8, complete genomePrepilin peptidase3e-28125
NC_011663:4579777:459648845964884597414927Shewanella baltica OS223 chromosome, complete genomeprepilin peptidase7e-28124
NC_010084:3051355:307312030731203074031912Burkholderia multivorans ATCC 17616 chromosome 1, completeprepilin peptidase1e-27123
NC_010804:450130:450742450742451653912Burkholderia multivorans ATCC 17616 chromosome 1, completeleader peptidase1e-27123
NC_009656:5297000:531243553124355313307873Pseudomonas aeruginosa PA7 chromosome, complete genometype 4 prepilin peptidase PilD1e-27123
NC_007645:5397526:542290554229055423783879Hahella chejuensis KCTC 2396, complete genomeType II secretory pathway, prepilin signal peptidase PulO and related peptidase2e-26119
NC_018080:5070687:508369850836985084570873Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 prepilin peptidase PilD2e-26119
NC_011992:773905:793657793657794538882Acidovorax ebreus TPSY, complete genomePrepilin peptidase4e-26118
NC_009439:860571:868675868675869544870Pseudomonas mendocina ymp, complete genomeprepilin peptidase7e-26117
NC_020829:1068438:107134610713461072218873Pseudomonas denitrificans ATCC 13867, complete genometype 4 prepilin peptidase PilD2e-25116
NC_008782:841134:845516845516846397882Acidovorax sp. JS42, complete genomePrepilin peptidase1e-25116
NC_008800:3642679:365363236536323654465834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,prepilin peptidase7e-25114
NC_007912:1111093:111688911168891117785897Saccharophagus degradans 2-40, complete genomePhosphoribosylformylglycinamidine cyclo-ligase7e-25114
NC_017267:3612682:362035636203563621219864Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetype IV prepilin peptidase8e-25114
NC_008321:458811:462703462703463629927Shewanella sp. MR-4, complete genomePrepilin peptidase1e-24113
NC_006834:1602994:162156216215621622425864Xanthomonas oryzae pv. oryzae KACC10331, complete genometype IV pre-pilin leader peptidase2e-24112
NC_007705:1583373:160373316037331604596864Xanthomonas oryzae pv. oryzae MAFF 311018, complete genometype IV pre-pilin leader peptidase2e-24112
NC_010717:1469911:148743014874301488293864Xanthomonas oryzae pv. oryzae PXO99A, complete genometype IV prepilin peptidase2e-24112
NC_003902:3666544:367592136759213676784864Xanthomonas campestris pv. campestris str. ATCC 33913, completetype IV pre-pilin leader peptidase2e-24112
NC_007086:1224867:127159412715941272457864Xanthomonas campestris pv. campestris str. 8004, complete genometype IV pre-pilin leader peptidase2e-24112
NC_017271:3641705:365343236534323654295864Xanthomonas campestris pv. raphani 756C chromosome, completetype IV prepilin peptidase2e-24112
NC_007508:3835000:384252338425233843386864Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype II secretory pathway prepilin signal peptidase5e-24111
NC_020064:3998715:405119540511954052043849Serratia marcescens FGI94, complete genometype 4 prepilin peptidase 16e-24111
NC_010688:1192410:124466712446671245530864Xanthomonas campestris pv. campestris, complete genomeType II secretory pathway prepilin signal peptidase2e-23109
NC_003919:3812778:382167038216703822533864Xanthomonas axonopodis pv. citri str. 306, complete genometype IV pre-pilin leader peptidase2e-23109
NC_004088:3505383:351557235155723516486915Yersinia pestis KIM, complete genometype IV prepilin peptidase1e-22107
NC_005810:3142384:316294531629453163859915Yersinia pestis biovar Microtus str. 91001, complete genomeprepilin peptidase1e-22107
NC_010634:3509880:352007335200733520915843Yersinia pseudotuberculosis PB1/+, complete genomepeptidase A24A domain-containing protein1e-22107
NC_006155:3596120:360631336063133607155843Yersinia pseudotuberculosis IP 32953, complete genomePrepilin peptidase1e-22107
NC_015672:2071141:207361120736112074393783Flexistipes sinusarabici DSM 4947 chromosome, complete genomePrepilin peptidase9e-23107
NC_017047:4379989:439545043954504396280831Rahnella aquatilis HX2 chromosome, complete genomeprepilin peptidase8e-23107
NC_015061:4286000:430156443015644302394831Rahnella sp. Y9602 chromosome, complete genomePrepilin peptidase7e-23107
NC_015224:1067390:108824310882431089076834Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,prepilin peptidase7e-23107
NC_010159:3448490:345968234596823460587906Yersinia pestis Angola, complete genometype IV prepilin peptidase2e-22106
NC_014029:1146900:116753011675301168369840Yersinia pestis Z176003 chromosome, complete genomeprepilin peptidase1e-22106
NC_017154:1089044:110967511096751110514840Yersinia pestis D106004 chromosome, complete genomeprepilin peptidase1e-22106
NC_017160:1092839:111234711123471113186840Yersinia pestis D182038 chromosome, complete genomeprepilin peptidase1e-22106
NC_008149:3373229:338341033834103384252843Yersinia pestis Nepal516, complete genomeprepilin peptidase1e-22106
NC_003143:875367:885548885548886390843Yersinia pestis CO92, complete genomeprepilin peptidase1e-22106
NC_008150:513783:534410534410535252843Yersinia pestis Antiqua, complete genomeprepilin peptidase1e-22106
NC_009381:775357:794859794859795701843Yersinia pestis Pestoides F chromosome, complete genomeprepilin peptidase1e-22106
NC_009708:1131500:115103411510341151867834Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype IV prepilin peptidase1e-22106
NC_017168:199381:218884218884219726843Yersinia pestis A1122 chromosome, complete genomeprepilin peptidase1e-22106
NC_017265:1000342:102097210209721021814843Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,prepilin peptidase1e-22106
NC_010465:1118147:113948311394831140325843Yersinia pseudotuberculosis YPIII, complete genomePrepilin peptidase3e-22105
NC_014924:725380:729963729963730826864Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomePrepilin peptidase1e-21103
NC_013894:1194458:119933211993321200078747Thermocrinis albus DSM 14484 chromosome, complete genomepeptidase A24A domain protein1e-20100
NC_012440:1841315:184782718478271848606780Persephonella marina EX-H1, complete genomeleader peptidase PppA1e-20100
NC_010644:254725:255180255180255962783Elusimicrobium minutum Pei191, complete genomepeptidase A24A domain-containing protein5e-2098.2
NC_014758:310394:314886314886315665780Calditerrivibrio nitroreducens DSM 19672 chromosome, completeprepilin peptidase7e-2097.4
NC_010814:2275199:230999123099912310767777Geobacter lovleyi SZ, complete genomepeptidase A24A domain protein2e-1996.3
NC_007946:3683371:368337136833713684048678Escherichia coli UTI89, complete genometype 4 prepilin-like proteins leader peptide processing enzyme4e-1892
NC_007205:60069:785617856179325765Candidatus Pelagibacter ubique HTCC1062, complete genomeType II Secretion PilD7e-1891.3
NC_015711:8909256:8925243892524389262501008Myxococcus fulvus HW-1 chromosome, complete genomeprepilin peptidase2e-1789.7
NC_013939:106681:122048122048122824777Deferribacter desulfuricans SSM1, complete genometype IV prepilin peptidase2e-1789.4
NC_007498:2475781:249129324912932492072780Pelobacter carbinolicus DSM 2380, complete genomeprepilin peptidase6e-1787.8
NC_008262:2498000:249804624980462498789744Clostridium perfringens SM101, complete genomesignal peptidase type IV6e-1684.7
NC_014632:1914500:194788319478831948620738Ilyobacter polytropus DSM 2926 chromosome, complete genomepeptidase A24A domain-containing protein2e-1582.8
NC_008095:7139056:7155008715500871560151008Myxococcus xanthus DK 1622, complete genomeprepilin peptidase2e-1582.8
NC_009457:351512:391466391466392227762Vibrio cholerae O395 chromosome 2, complete sequenceleader peptidase TcpJ9e-1580.5
NC_012668:2744393:276231727623172763078762Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTCP pilin signal peptidase TcpA processing9e-1580.5
NC_015761:299386:338928338928339749822Salmonella bongori NCTC 12419, complete genomeprepilin peptidase1e-1480.1
NC_019978:1816940:181886618188661819600735Halobacteroides halobius DSM 5150, complete genomeprepilin signal peptidase PulO-like peptidase1e-1377.4
NC_014614:260782:260782260782261540759Clostridium sticklandii, complete genomeputative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD3e-1375.5
NC_011979:3341099:336903233690323369823792Geobacter sp. FRC-32, complete genomepeptidase A24A domain protein4e-1272
NC_009437:1189432:119451511945151195291777Caldicellulosiruptor saccharolyticus DSM 8903, complete genomepeptidase A24A domain-containing protein1e-1170.1
NC_014720:980000:982251982251983027777Caldicellulosiruptor kronotskyensis 2002 chromosome, completeprepilin peptidase3e-1168.9
NC_013521:1976331:198781419878141988599786Sanguibacter keddieii DSM 10542, complete genomeprepilin signal peptidase PulO-like peptidase3e-1065.9
NC_015380:196554:201941201941202321381Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeleader peptidase (Prepilin peptidase) / N-methyltransferase7e-1064.3
NC_009664:3969609:398418539841853984976792Kineococcus radiotolerans SRS30216, complete genomepeptidase A24A domain protein2e-0963.2
NC_004193:375416:645987645987646742756Oceanobacillus iheyensis HTE831, complete genomeleader peptide processing enzyme2e-0963.2
NC_010001:3421710:344106934410693441824756Clostridium phytofermentans ISDg, complete genomepeptidase A24A domain protein3e-0859.3
NC_014228:3022903:302290330229033023349447Xenorhabdus nematophila ATCC 19061, complete genomebifunctional prepilin peptidase: leader peptidase; methyl transferase (General Secretory Pathway) (fragment)3e-0859.3
NC_008358:2808299:281362028136202814276657Hyphomonas neptunium ATCC 15444, complete genomeprepilin peptidase5e-0858.2
NC_015380:196554:201558201558201896339Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeleader peptidase (Prepilin peptidase) / N-methyltransferase2e-0756.2
NC_014761:516981:5310145310145321021089Oceanithermus profundus DSM 14977 chromosome, complete genomeprepilin peptidase2e-0756.2
NC_015391:2523451:255583525558352556569735Carnobacterium sp. 17-4 chromosome, complete genomemembrane protease and transmethylase1e-0653.9
NC_017167:407352:423756423756424619864Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1peptidase A24A domain-containing protein4e-0652