Pre_GI: BLASTP Hits

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Query: NC_013716:4728500:4743734 Citrobacter rodentium ICC168, complete genome

Start: 4743734, End: 4744210, Length: 477

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:3683371:368407736840773684553477Escherichia coli UTI89, complete genomebacterioferrin1e-78291
NC_016818:362548:372959372959373438480Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completebacterioferritin1e-72271
NC_007645:3756654:377280237728023773266465Hahella chejuensis KCTC 2396, complete genomebacterioferritin3e-56217
NC_007645:6955479:695547969554796955958480Hahella chejuensis KCTC 2396, complete genomebacterioferritin8e-54208
NC_007963:3225306:322991032299103230389480Chromohalobacter salexigens DSM 3043, complete genomebacterioferritin8e-53205
NC_003902:555699:579977579977580447471Xanthomonas campestris pv. campestris str. ATCC 33913, completebacterioferritin9e-52202
NC_007086:557789:582061582061582531471Xanthomonas campestris pv. campestris str. 8004, complete genomebacterioferritin9e-52202
NC_014909:219498:226985226985227455471Candidatus Blochmannia vafer str. BVAF chromosome, complete genomebacterioferritin1e-48191
NC_008390:2448379:246881324688132469289477Burkholderia cepacia AMMD chromosome 1, complete sequencebacterioferritin4e-47186
NC_004556:1933944:194289719428971943361465Xylella fastidiosa Temecula1, complete genomebacterioferritin1e-46185
NC_010681:221416:237119237119237598480Burkholderia phytofirmans PsJN chromosome 1, complete sequencebacterioferritin4e-46183
NC_005061:214168:220512220512220982471Candidatus Blochmannia floridanus, complete genomebacterioferritin4e-45180
NC_008789:942309:960353960353960859507Halorhodospira halophila SL1, complete genomebacterioferritin4e-44176
NC_016027:346768:354606354606355172567Gluconacetobacter xylinus NBRC 3288, complete genomebacterioferritin3e-41167
NC_013209:2536500:255186825518682552353486Acetobacter pasteurianus IFO 3283-01, complete genomebacterioferritin1e-40165
NC_017100:2538461:255307525530752553560486Acetobacter pasteurianus IFO 3283-03, complete genomebacterioferritin1e-40165
NC_017108:2535798:255041225504122550897486Acetobacter pasteurianus IFO 3283-12, complete genomebacterioferritin1e-40165
NC_017111:2535000:255043025504302550915486Acetobacter pasteurianus IFO 3283-32, complete genomebacterioferritin1e-40165
NC_017121:2535803:255041725504172550902486Acetobacter pasteurianus IFO 3283-07, complete genomebacterioferritin1e-40165
NC_017125:2538441:255305525530552553540486Acetobacter pasteurianus IFO 3283-22, complete genomebacterioferritin1e-40165
NC_017146:2538483:255309725530972553582486Acetobacter pasteurianus IFO 3283-26, complete genomebacterioferritin1e-40165
NC_018679:2412000:241308324130832413559477Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative glutathione-regulated potassium-efflux system protein5e-40163
NC_010120:1065833:107142510714251071898474Neisseria meningitidis 053442, complete genomebacterioferritin B6e-40162
NC_008009:4421992:444770944477094448194486Acidobacteria bacterium Ellin345, complete genomebacterioferritin4e-38156
NC_018679:2412000:241261624126162413083468Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completebacterioferritin7e-36149
NC_013440:6045708:605949860594986059968471Haliangium ochraceum DSM 14365, complete genomebacterioferritin7e-36149
NC_014034:995661:100107910010791001564486Rhodobacter capsulatus SB1003 chromosome, complete genomebacterioferritin5e-33140
NC_002516:4747154:475166547516654752129465Pseudomonas aeruginosa PAO1, complete genomebacterioferritin6e-30129
NC_007005:5367454:538755453875545388018465Pseudomonas syringae pv. syringae B728a, complete genomeBacterioferritin4e-29127
NC_009439:4267356:426877942687794269243465Pseudomonas mendocina ymp, complete genomebacterioferritin9e-29125
NC_015556:717993:734279734279734743465Pseudomonas fulva 12-X chromosome, complete genomebacterioferritin2e-27121
NC_010322:583842:583842583842584306465Pseudomonas putida GB-1 chromosome, complete genomebacterioferritin3e-27120
NC_008536:3282971:329545332954533295992540Solibacter usitatus Ellin6076, complete genomebacterioferritin4e-27120
NC_010120:1065833:107192610719261072360435Neisseria meningitidis 053442, complete genomebacterioferritin A5e-24110
NC_009033:755226:766738766738767157420Staphylothermus marinus F1, complete genomeFerritin, Dps family protein3e-0857.4
NC_008344:811386:829866829866830288423Nitrosomonas eutropha C91, complete genomeFerritin, Dps family protein2e-0754.7