Pre_GI: BLASTP Hits

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Query: NC_013716:4728500:4736113 Citrobacter rodentium ICC168, complete genome

Start: 4736113, End: 4738338, Length: 2226

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:4728500:4741124474112447433282205Citrobacter rodentium ICC168, complete genomeputative polysaccharide degrading enzyme01098
NC_013716:4728500:4738734473873447406201887Citrobacter rodentium ICC168, complete genomeputative polysaccharide degrading enzyme01063
NC_015061:3725921:3736946373694637398132868Rahnella sp. Y9602 chromosome, complete genomeglycoside hydrolase family 180866
NC_017047:3793000:3801607380160738044742868Rahnella aquatilis HX2 chromosome, complete genomeglycoside hydrolase0866
NC_016818:362548:3703043703043725082205Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completechitinase0636
NC_013716:4728500:4733292473329247357152424Citrobacter rodentium ICC168, complete genomeputative polysaccharide degrading enzyme5e-84312
NC_014484:1690272:1735547173554717374811935Spirochaeta thermophila DSM 6192 chromosome, complete genomeglycosyl hydrolases family 188e-66252
NC_021171:608315:6083156083156101231809Bacillus sp. 1NLA3E, complete genomechitinase9e-45182
NC_014410:2329838:2348586234858623503011716Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,glycoside hydrolase family 181e-44182
NC_010674:615963:6159636159636181162154Clostridium botulinum B str. Eklund 17B, complete genomechitinase A2e-42174
NC_010995:1139867:1163789116378911664612673Cellvibrio japonicus Ueda107, complete genomeendo-chitinase, putative, chi18B8e-41169
NC_014376:3547218:3551875355187535533381464Clostridium saccharolyticum WM1 chromosome, complete genomeglycoside hydrolase family 182e-40168
NC_019892:3086493:3097909309790930990421134Singulisphaera acidiphila DSM 18658 chromosome, complete genomechitinase2e-38161
NC_018868:619113:6191136191136225713459Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeglycosyl hydrolase family chitinase2e-36154
NC_015510:6653159:6691694669169466926951002Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeChitinase1e-35152
NC_011898:1880960:1899237189923719006851449Clostridium cellulolyticum H10, complete genomeglycoside hydrolase family 184e-35150
NC_012667:703852:7038527038527070073156Vibrio cholerae MJ-1236 chromosome 2, complete genomechitodextrinase precursor4e-34147
NC_011663:1500772:1519493151949315220992607Shewanella baltica OS223 chromosome, complete genomeglycoside hydrolase5e-33143
NC_011660:2509362:2509362250936225116442283Listeria monocytogenes HCC23 chromosome, complete genomechitinase B8e-33142
NC_007954:2440000:2456923245692324583201398Shewanella denitrificans OS217, complete genomeglycoside hydrolase, family 183e-31137
NC_007677:3469661:3471034347103434721971164Salinibacter ruber DSM 13855, complete genomechitinase A1 precursor8e-31135
NC_018868:619113:6226396226396242191581Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomechitinase2e-30134
NC_018750:5078705:5101561510156151028981338Streptomyces venezuelae ATCC 10712, complete genomeChitinase2e-30134
NC_004460:1313468:1314417131441713169542538Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein2e-28128
NC_016109:2938000:2946797294679729481281332Kitasatospora setae KM-6054, complete genomechitinase3e-27124
NC_013174:1459730:1478197147819714801521956Jonesia denitrificans DSM 20603, complete genomeChitinase4e-27124
NC_017093:1411532:1417105141710514183821278Actinoplanes missouriensis 431, complete genomeputative glycosyl hydrolase8e-27122
NC_009380:3734773:3734773373477337363951623Salinispora tropica CNB-440 chromosome, complete genomeglycoside hydrolase family protein2e-26121
NC_015957:3282183:3302966330296633042431278Streptomyces violaceusniger Tu 4113 chromosome, complete genomeglycoside hydrolase family protein2e-26121
NC_018750:5399316:5412029541202954137891761Streptomyces venezuelae ATCC 10712, complete genomeChitinase3e-25117
NC_015711:570910:5877045877045898542151Myxococcus fulvus HW-1 chromosome, complete genomeputative chitinase6e-24113
NC_014933:3856561:3865514386551438672471734Bacteroides helcogenes P 36-108 chromosome, complete genomeChitinase2e-21105
NC_012483:30784:5296852968555742607Acidobacterium capsulatum ATCC 51196, complete genomechitinase A1e-20102
NC_014318:5586287:5589925558992555921382214Amycolatopsis mediterranei U32 chromosome, complete genomechitinase2e-20101
NC_017186:5586328:5589966558996655921792214Amycolatopsis mediterranei S699 chromosome, complete genomechitinase2e-20101
NC_021177:5697210:5717921571792157197951875Streptomyces fulvissimus DSM 40593, complete genomeChitinase III3e-20100
NC_014121:2514544:2516383251638325176391257Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative chitinase II1e-1999
NC_014623:1273025:1273025127302512745871563Stigmatella aurantiaca DW4/3-1 chromosome, complete genomechitinase c4e-1790.5
NC_010336:213148:2252332252332279112679Francisella philomiragia subsp. philomiragia ATCC 25017, completechitinase, glycosyl hydrolase family 181e-1689.4
NC_012483:30784:5154251542528281287Acidobacterium capsulatum ATCC 51196, complete genomechitinase A2e-1481.6
NC_016612:2223357:2237367223736722394662100Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-1172
NC_004663:3502745:3516595351659535176381044Bacteroides thetaiotaomicron VPI-5482, complete genomechitinase7e-1169.7
NC_014472:791855:7941197941197951411023Flavobacteriales bacterium HTCC2170 chromosome, complete genomeChitinase2e-0964.7
NC_015844:3524175:3558508355850835598301323Zobellia galactanivorans, complete genomechitin-binding lectin4e-0757
NC_009012:3421000:3421057342105734228081752Clostridium thermocellum ATCC 27405, complete genomeglycoside hydrolase, family 186e-0653.5