Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:4408201:4420697 Citrobacter rodentium ICC168, complete genome

Start: 4420697, End: 4421506, Length: 810

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011740:4007000:401490840149084015717810Escherichia fergusonii ATCC 35469, complete genomelipopolysaccharide core biosynthesis protein5e-120430
NC_011601:4036590:404579440457944046567774Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomelipopolysaccharide core biosynthesis protein3e-117421
NC_010473:3883701:389494538949453895796852Escherichia coli str. K-12 substr. DH10B, complete genomelipopolysaccharide core biosynthesis protein1e-116419
NC_000913:3786124:379736837973683798219852Escherichia coli K12, complete genomelipopolysaccharide core biosynthesis protein1e-116419
AC_000091:3827856:384021938402193841070852Escherichia coli W3110 DNA, complete genomelipopolysaccharide core biosynthesis protein1e-116419
NC_012759:3675396:368569436856943686545852Escherichia coli BW2952 chromosome, complete genomelipopolysaccharide core biosynthesis protein1e-116419
NC_020063:97436:106635106635107444810Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein2e-110398
NC_015761:3611993:361990836199083620717810Salmonella bongori NCTC 12419, complete genomelipopolysaccharide core biosynthesis protein RfaZ1e-104379
NC_010067:3846962:385827538582753859084810Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-103374
NC_011080:3875320:388324438832443884053810Salmonella enterica subsp. enterica serovar Newport str. SL254,lipopolysaccharide core biosynthesis protein RfaZ2e-101369
NC_011149:3822000:383017538301753830984810Salmonella enterica subsp. enterica serovar Agona str. SL483,lipopolysaccharide core biosynthesis protein RfaZ2e-101369
NC_011094:3778000:378616137861613786970810Salmonella enterica subsp. enterica serovar Schwarzengrund strlipopolysaccharide core biosynthesis protein2e-101369
NC_011294:3782655:379190837919083792717810Salmonella enterica subsp. enterica serovar Enteritidis strlipopolysaccharide core biosynthesis protein2e-101369
NC_011083:3915500:392381739238173924626810Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,lipopolysaccharide core biosynthesis protein RfaZ3e-101368
NC_003197:3902500:391080739108073911616810Salmonella typhimurium LT2, complete genomelipopolysaccharide core biosynthetic protein3e-101368
NC_016810:3923988:393212139321213932930810Salmonella enterica subsp. enterica serovar Typhimurium strlipopolysaccharide core biosynthesis protein RfaZ3e-101368
NC_016856:3916500:392449939244993925308810Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Slipopolysaccharide core biosynthesis protein3e-101368
NC_016857:3924000:393212239321223932931810Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lipopolysaccharide core biosynthesis protein3e-101368
NC_016860:3925500:393370339337033934512810Salmonella enterica subsp. enterica serovar Typhimurium strlipopolysaccharide core biosynthesis protein3e-101368
NC_016863:3864000:387210638721063872915810Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1lipopolysaccharide core biosynthesis protein3e-101368
NC_017046:3923000:393094839309483931757810Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipopolysaccharide core biosynthesis protein RfaZ3e-101368
NC_006905:3845000:385310838531083853917810Salmonella enterica subsp. enterica serovar Choleraesuis strlipopolysaccharide core biosynthesis2e-101368
NC_012125:3840000:384796338479633848772810Salmonella enterica subsp. enterica serovar Paratyphi C strainlipopolysaccharide core biosynthesis protein2e-101368
NC_010102:3851500:385975438597543860563810Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-101367
NC_016831:3875134:388686638868663887675810Salmonella enterica subsp. enterica serovar Gallinarum/pullorumlipopolysaccharide core biosynthesis protein RfaZ7e-101367
NC_006511:3690828:369875136987513699560810Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCClipopolysaccharide core biosynthesis protein RfaZ3e-100365
NC_011147:3686500:369442836944283695237810Salmonella enterica subsp. enterica serovar Paratyphi A strlipopolysaccharide core biosynthesis protein3e-100365
NC_016832:3900000:391181839118183912627810Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Lipopolysaccharide core biosynthesis protein rfaZ4e-100364
NC_004631:3910451:392302139230213923830810Salmonella enterica subsp. enterica serovar Typhi Ty2, completelipopolysaccharide core biosynthesis protein RfaZ4e-100364
NC_003198:3924952:393752239375223938331810Salmonella enterica subsp. enterica serovar Typhi str. CT18,lipopolysaccharide core biosynthesis protein RfaZ4e-100364
NC_002947:3404000:340464734046473405480834Pseudomonas putida KT2440, complete genomelipopolysaccharide core biosynthesis protein, putative9e-1994.4
NC_017986:5509569:550956955095695510285717Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1789.7
NC_010501:3013103:302018930201893020977789Pseudomonas putida W619, complete genomelipopolysaccharide core biosynthesis domain protein4e-1685.1