Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:4306695:4369768 Citrobacter rodentium ICC168, complete genome

Start: 4369768, End: 4370901, Length: 1134

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:259695:2692982692982704251128Yersinia pestis Angola, complete genomehypothetical protein2e-29129
NC_004088:3859173:3868671386867138699031233Yersinia pestis KIM, complete genomehypothetical protein5e-29129
NC_003143:741169:7526297526297538611233Yersinia pestis CO92, complete genomehypothetical protein5e-29129
NC_005810:3333000:3344571334457133458031233Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-29129
NC_006155:3992818:4007557400755740086841128Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-29129
NC_009381:522731:5341905341905353171128Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-29129
NC_009708:692508:7040227040227051491128Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-29129
NC_014029:792719:8041738041738053001128Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-29129
NC_017154:734875:7463367463367474631128Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-29129
NC_017160:737000:7485147485147496411128Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-29129
NC_017168:341233:3515463515463526731128Yersinia pestis A1122 chromosome, complete genomepilus assembly protein CpaE5e-29129
NC_017265:3724500:3734136373413637352631128Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Type II/IV secretion system ATPase TadZ/CpaE,associated with Flp pilus assembly5e-29129
NC_010634:3905369:3919018391901839201451128Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein4e-29129
NC_010465:733916:7443917443917455181128Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein4e-29129
NC_008150:3430000:3439658343965834407851128Yersinia pestis Antiqua, complete genomehypothetical protein5e-29128
NC_008800:3955284:3965213396521339663311119Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein4e-25115
NC_012913:167034:1781321781321792531122Aggregatibacter aphrophilus NJ8700, complete genomeTadZ3e-24112
NC_002940:1065246:1066538106653810676591122Haemophilus ducreyi 35000HP, complete genomeflp operon protein D8e-23108
NC_016513:974402:9887759887759898991125Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeflp operon protein D8e-22105
NC_013416:668152:6825166825166836401125Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTadZ2e-21103
NC_008149:650706:662505662505663293789Yersinia pestis Nepal516, complete genomehypothetical protein6e-1375.5
NC_008149:650706:662167662167662709543Yersinia pestis Nepal516, complete genomehypothetical protein4e-1065.9