Pre_GI: BLASTP Hits

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Query: NC_013716:4306695:4367368 Citrobacter rodentium ICC168, complete genome

Start: 4367368, End: 4368240, Length: 873

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015224:3820338:384102738410273841860834Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein8e-1271.2
NC_008800:3955284:396275339627533963586834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein2e-1170.1
NC_002940:1065246:106954010695401070376837Haemophilus ducreyi 35000HP, complete genomeflp operon protein C3e-1066.2
NC_009708:692508:706763706763707584822Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-0755.8
NC_008149:650706:664906664906665772867Yersinia pestis Nepal516, complete genomemembrane protein9e-0754.3
NC_005810:3333000:334731133473113348177867Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein9e-0754.3
NC_004088:3859173:386629738662973867163867Yersinia pestis KIM, complete genomehypothetical protein9e-0754.3
NC_008150:3430000:343717934371793438045867Yersinia pestis Antiqua, complete genomehypothetical protein9e-0754.3
NC_010159:259695:266819266819267685867Yersinia pestis Angola, complete genomehypothetical protein9e-0754.3
NC_003143:741169:755369755369756235867Yersinia pestis CO92, complete genomehypothetical protein9e-0754.3
NC_009381:522731:536930536930537796867Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein9e-0754.3
NC_014029:792719:806913806913807779867Yersinia pestis Z176003 chromosome, complete genomehypothetical protein9e-0754.3
NC_017154:734875:749076749076749942867Yersinia pestis D106004 chromosome, complete genomehypothetical protein9e-0754.3
NC_017160:737000:751254751254752120867Yersinia pestis D182038 chromosome, complete genomehypothetical protein9e-0754.3
NC_017168:341233:349067349067349933867Yersinia pestis A1122 chromosome, complete genomehypothetical protein9e-0754.3
NC_017265:3724500:373165737316573732523867Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Flp pilus assembly protein RcpC/CpaB9e-0754.3
NC_016513:974402:991799991799992623825Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeflp operon protein C7e-0651.6
NC_013416:668152:685540685540686364825Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRcpC7e-0651.6