Pre_GI: BLASTP Hits

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Query: NC_013716:4306695:4363326 Citrobacter rodentium ICC168, complete genome

Start: 4363326, End: 4364114, Length: 789

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:2898434:2911789291178929146982910Citrobacter rodentium ICC168, complete genomeputative outer membrane autotransporter8e-25114
NC_011751:1446073:1466883146688314685321650Escherichia coli UMN026 chromosome, complete genomehypothetical protein5e-1994.7
NC_000913:1188999:1218824121882412214452622Escherichia coli K12, complete genome1e-1893.6
NC_010473:1245284:1259065125906512616862622Escherichia coli str. K-12 substr. DH10B, complete genome1e-1893.6
NC_010468:2699000:2704151270415127067712621Escherichia coli ATCC 8739, complete genome1e-1893.6
NC_009425:1:787848174740Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter2e-1789.4
CU928160:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold5e-1685.1
NC_011741:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative outer membrane autotransporter barrel pectin lyase fold5e-1685.1
NC_011750:1978801:1980462198046219831102649Escherichia coli IAI39 chromosome, complete genomeputative outer membrane autotransporter barrel, putative pectin lyase fold4e-1685.1
NC_010498:1995500:1999462199946220017832322Escherichia coli SMS-3-5, complete genomeautotransporter (AT) family porin7e-1684.7
NC_000913:1188999:1220429122042912214451017Escherichia coli K12, complete genome8e-1684.3
NC_013364:1477248:1514816151481615165671752Escherichia coli O111:H- str. 11128, complete genome8e-1684.3
NC_011748:1300863:1315755131575513180642310Escherichia coli 55989, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold8e-1684.3
CU928145:1300863:1315755131575513180642310Escherichia coli 55989 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold8e-1684.3
NC_011415:1273551:1287653128765312899742322Escherichia coli SE11 chromosome, complete genomeputative autotransporter7e-1684.3
NC_013361:1634226:1646955164695516492762322Escherichia coli O26:H11 str. 11368 chromosome, complete genomeAidA-I adhesin7e-1684.3
NC_013353:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009, complete genomeAidA-I adhesin-like protein1e-1584
CP002185:1298675:1312778131277813150992322Escherichia coli W, complete genome1e-1584
AP010958:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009 DNA, complete genomeAidA-I adhesin-like protein1e-1584
NC_014618:2788533:2800332280033228046994368Enterobacter cloacae SCF1 chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein3e-1582.4
NC_009425:1:1047210472152564785Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter1e-1480.5
NC_020063:2230000:2249441224944122548615421Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane autotransporter barrel domain-containing protein2e-1479.7
NC_010498:2555706:2556284255628425641977914Escherichia coli SMS-3-5, complete genomeouter membrane autotransporter6e-1478.2
NC_012125:3879917:3888198388819838909212724Salmonella enterica subsp. enterica serovar Paratyphi C strainautotransported protein7e-1477.8
CU928160:1579375:1602899160289916083195421Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative exported protein2e-1376.3
NC_011741:1579375:1602899160289916083195421Escherichia coli IAI1 chromosome, complete genomeputative lipoprotein/autotransporter domain-containing protein2e-1376.3
NC_016816:3333000:3357378335737833603352958Pantoea ananatis LMG 5342, complete genomeType V secretory pathway, adhesin AidA2e-1376.3
NC_010468:2345781:2345781234578123512015421Escherichia coli ATCC 8739, complete genomeouter membrane autotransporter barrel domain protein2e-1376.3
NC_011740:1831845:1835772183577218385102739Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative exported protein3e-1375.5
NC_015663:2807574:2829400282940028361616762Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-1375.5
NC_009800:1589000:1609488160948816149085421Escherichia coli HS, complete genome6e-1374.7
CP002516:2395578:2395578239557824009985421Escherichia coli KO11, complete genomeouter membrane autotransporter barrel domain protein6e-1374.7
NC_016902:2395578:2395578239557824009985421Escherichia coli KO11FL chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein6e-1374.7
NC_012947:2228235:2230071223007122316211551Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane autotransporter barrel domain protein5e-1374.7
NC_010473:1661000:1680314168031416817141401Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein5e-1374.7
AC_000091:1574000:1594379159437915957791401Escherichia coli W3110 DNA, complete genome5e-1374.7
NC_000913:1570431:1590689159068915920891401Escherichia coli K12, complete genomeconserved protein, predicted pseudogene5e-1374.7
NC_012759:1462490:1482748148274814841481401Escherichia coli BW2952 chromosome, complete genomehypothetical protein5e-1374.7
NC_012967:1546000:1569232156923215706321401Escherichia coli B str. REL606 chromosome, complete genome5e-1374.7
CP002185:1681327:1704944170494417102775334Escherichia coli W, complete genomepredicted lipoprotein7e-1374.7
NC_002655:1966464:1970492197049219718921401Escherichia coli O157:H7 EDL933, complete genomeputative ATP-binding component of a transport system and adhesin protein3e-1272.4
NC_008150:3711953:37119533711953372307011118Yersinia pestis Antiqua, complete genomeputative autotransporter protein6e-1271.2
NC_017168:4509918:45280984528098453921511118Yersinia pestis A1122 chromosome, complete genomeputative autotransporter protein6e-1271.2
NC_017154:848500:87203687203688315311118Yersinia pestis D106004 chromosome, complete genomeputative autotransporter protein6e-1271.2
NC_008149:3648139:36716853671685368280211118Yersinia pestis Nepal516, complete genomeautotransporter protein6e-1271.2
NC_010465:804249:80424980424981718712939Yersinia pseudotuberculosis YPIII, complete genomeouter membrane autotransporter barrel domain protein1e-1170.5
NC_010067:2304313:2326436232643623288502415Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1170.1
NC_011149:3863913:3879256387925638821232868Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane autotransporter barrel domain5e-1065.1
NC_016863:3905875:3916060391606039189272868Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative autotransporter7e-1064.7
NC_016860:3964000:3977717397771739805242808Salmonella enterica subsp. enterica serovar Typhimurium strputative autotransported protein6e-1064.7
NC_012967:3769499:3788241378824137917383498Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-0859.3
NC_012947:44512:5269952699561963498Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane autotransporter barrel domain protein3e-0859.3
NC_009801:1296488:131199213119921312912921Escherichia coli E24377A, complete genomeporin, autotransporter (AT) family3e-0755.5
NC_010658:1193225:120892712089271209847921Shigella boydii CDC 3083-94, complete genome4e-0755.5
NC_009800:1254409:126977812697781270671894Escherichia coli HS, complete genome8e-0754.3