Pre_GI: BLASTP Hits

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Query: NC_013716:3708415:3727281 Citrobacter rodentium ICC168, complete genome

Start: 3727281, End: 3728048, Length: 768

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:3708415:372607037260703726837768Citrobacter rodentium ICC168, complete genomehypothetical protein6e-134476
NC_008570:1986466:199487319948731995862990Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein7e-1580.9
NC_015846:531984:544880544880545662783Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein5e-1375.1
NC_015846:531984:543763543763544548786Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein7e-1270.9
NC_014310:1338936:134976113497611350675915Ralstonia solanacearum PSI07 megaplasmid, complete sequencetransmembrane protein3e-1168.9
NC_003296:1341353:135085613508561351773918Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN5e-1168.6
NC_008786:266959:2787652787652800931329Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein5e-1168.2
NC_004129:2609189:261439226143922615327936Pseudomonas fluorescens Pf-5, complete genomehypothetical protein8e-1167.4
NC_016830:952342:968253968253969110858Pseudomonas fluorescens F113 chromosome, complete genometransmembrane protein1e-0963.5
NC_015164:3727500:374569637456963746397702Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein2e-0963.2
NC_008786:266959:2852442852442865721329Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein9e-0960.8
NC_015164:3759959:378056337805633781300738Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein1e-0860.5
NC_014310:94645:1088421088421098941053Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein3e-0858.9
NC_008786:266959:2820152820152833431329Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein8e-0857.8
NC_014311:1635408:164346416434641644336873Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein1e-0757.4
NC_015164:493159:501285501285502007723Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein2e-0756.2
NC_008786:266959:2866082866082879391332Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein4e-0755.5