Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:3512950:3544707 Citrobacter rodentium ICC168, complete genome

Start: 3544707, End: 3545138, Length: 432

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:3328844:334341233434123343876465Enterobacter aerogenes EA1509E, complete genomePilL1e-54211
NC_004547:590844:6042376042376055531317Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein9e-22102
NC_014029:331919:358410358410359042633Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-21101
NC_014228:3391500:342119734211973421733537Xenorhabdus nematophila ATCC 19061, complete genomeputative pilL protein (fragment)2e-21101
NC_009832:358291:373757373757374401645Serratia proteamaculans 568, complete genometype IV B pilus protein3e-21100
NC_015567:313035:328376328376329020645Serratia sp. AS9 chromosome, complete genometype IV B pilus protein4e-21100
NC_015566:316340:328211328211328855645Serratia sp. AS12 chromosome, complete genometype IV B pilus protein4e-21100
NC_013892:3278647:329832832983283298864537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein (fragment)1e-2098.2
NC_016845:4539381:454404645440464544615570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,type IV B pilus protein8e-2095.9
NC_009512:3282500:331470433147043315219516Pseudomonas putida F1, complete genomehypothetical protein9e-1992
NC_005126:1223042:1227913122791312289741062Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-1891.7
NC_012731:600518:618745618745619452708Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative type IV pilus protein1e-1891.7
NC_016830:3869572:392775739277573928299543Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-1891.3
NC_004129:5373886:5399717539971754008621146Pseudomonas fluorescens Pf-5, complete genomepilL protein6e-1889.4
NC_008463:5246954:5277443527744352785671125Pseudomonas aeruginosa UCBPP-PA14, complete genometype IV B pilus protein9e-1889
NC_018080:5091772:5122434512243451235551122Pseudomonas aeruginosa DK2 chromosome, complete genometype IV B pilus protein2e-1787.4
NC_009656:4527457:4603026460302646041501125Pseudomonas aeruginosa PA7 chromosome, complete genometype IV B pilus protein3e-1787
NC_013892:1483000:149830414983041498840537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein1e-1684.7
NC_006513:1379735:146161514616151462184570Azoarcus sp. EbN1, complete genomehypothetical protein1e-1684.7
NC_010170:1498253:153070915307091531308600Bordetella petrii, complete genomeputative secreted protein2e-1684.3
NC_009138:1974935:201019220101922010812621Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-1684
NC_008782:2326439:234708123470812347692612Acidovorax sp. JS42, complete genomehypothetical protein3e-1684
NC_012691:2614603:265491526549152655478564Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-1582
NC_007005:1705406:1705406170540617065391134Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-1581.6
NC_012912:483390:517914517914518483570Dickeya zeae Ech1591, complete genomeputative secreted protein1e-1581.6
NC_011662:1058794:106346710634671064039573Thauera sp. MZ1T, complete genomehypothetical protein2e-1581.3
NC_015379:2417312:245286824528682453395528Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative exported protein3e-1580.9
NC_010170:4533416:453812745381274538705579Bordetella petrii, complete genomeputative lipoprotein2e-1580.9
NC_010002:4544818:455769445576944558272579Delftia acidovorans SPH-1, complete genomeputative secreted protein2e-1580.9
NC_011992:1234610:123873112387311239330600Acidovorax ebreus TPSY, complete genomeputative secreted protein5e-1579.7
NC_008825:2525380:254173025417302542311582Methylibium petroleiphilum PM1, complete genomehypothetical protein1e-1478.2
NC_014532:3555550:357098835709883571638651Halomonas elongata DSM 2581, complete genomeK02487 type IV pili sensor histidine kinase/response regulator2e-1477.8
NC_008752:558828:575379575379575948570Acidovorax avenae subsp. citrulli AAC00-1, complete genomePilL protein3e-1477
NC_008344:49039:989569895699537582Nitrosomonas eutropha C91, complete genomehypothetical protein7e-1269.3
NC_007484:667879:675757675757676251495Nitrosococcus oceani ATCC 19707, complete genomePilL protein2e-0754.3