Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3542681 Citrobacter rodentium ICC168, complete genome

Start: 3542681, End: 3543016, Length: 336

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:3328844:334564033456403346047408Enterobacter aerogenes EA1509E, complete genomeFIG01045828: hypothetical protein1e-51201
NC_006513:1379735:145912114591211459657537Azoarcus sp. EbN1, complete genomehypothetical protein1e-26118
NC_011662:1058794:106095910609591061492534Thauera sp. MZ1T, complete genomehypothetical protein3e-24110
NC_008782:2326439:234449623444962345029534Acidovorax sp. JS42, complete genomehypothetical protein4e-24110
NC_015422:1876102:187671918767191877252534Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein5e-24109
NC_008825:2525380:254436325443632544896534Methylibium petroleiphilum PM1, complete genomehypothetical protein5e-24109
NC_012691:2614603:265744426574442657989546Tolumonas auensis DSM 9187, complete genomeputative secreted protein3e-23107
NC_008344:49039:964559645596997543Nitrosomonas eutropha C91, complete genomehypothetical protein5e-22102
NC_016845:4539381:454151845415184542030513Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-22102
NC_003919:2639080:263968826396882640260573Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-21101
NC_014228:3391500:342240734224073422949543Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-21101
NC_013892:3278647:329953832995383300077540Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-21100
NC_009708:4182460:419766841976684198189522Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-21100
NC_009832:358291:376536376536377060525Serratia proteamaculans 568, complete genomehypothetical protein5e-2199.8
NC_014029:331919:361177361177361701525Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-2199.8
NC_011901:2983555:298355529835552984091537Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein6e-2199.4
NC_013892:1483000:149708814970881497630543Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-2199.4
NC_018080:5091772:515336551533655153865501Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-2096.7
NC_008752:558828:572783572783573367585Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein5e-2096.3
NC_010170:1498253:153325815332581533806549Bordetella petrii, complete genomehypothetical protein9e-2095.5
NC_014228:3391500:340217234021723402501330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1995.1
NC_011992:1234610:123624512362451236784540Acidovorax ebreus TPSY, complete genomeputative secreted protein1e-1994.7
NC_011751:256830:273350273350273862513Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-1994.7
NC_012912:483390:515437515437515979543Dickeya zeae Ech1591, complete genomehypothetical protein2e-1994.4
NC_009138:1974935:201276820127682013316549Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide2e-1994.4
NC_008253:257059:270484270484270972489Escherichia coli 536, complete genomehypothetical protein3e-1994
NC_007946:258747:271135271135271647513Escherichia coli UTI89, complete genomehypothetical protein3e-1994
NC_008563:258725:271113271113271625513Escherichia coli APEC O1, complete genomehypothetical protein3e-1994
NC_011742:258746:271134271134271646513Escherichia coli S88 chromosome, complete genomehypothetical protein3e-1994
NC_011745:258727:273033273033273545513Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-1994
NC_015379:2417312:245091224509122451340429Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein3e-1994
NC_009656:4527457:462835746283574628857501Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-1993.6
NC_014532:3555550:357447835744783575026549Halomonas elongata DSM 2581, complete genomehypothetical protein5e-1993.2
NC_004547:611178:624609624609625130522Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein9e-1992
NC_015567:313035:331149331149331673525Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein2e-1891.3
NC_015566:316340:330984330984331508525Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein2e-1891.3
NC_005126:1223042:124503512450351245571537Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1890.9
NC_010170:4533416:453560545356054536153549Bordetella petrii, complete genomeconserved exported protein6e-1889.4
NC_010002:4544818:456024645602464560794549Delftia acidovorans SPH-1, complete genomehypothetical protein6e-1889.4
NC_007005:1636875:164312416431241643630507Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-1788.2
NC_016830:4010637:401815740181574018474318Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-1787.8
NC_004129:5373886:542472054247205425226507Pseudomonas fluorescens Pf-5, complete genomehypothetical protein4e-1786.7
NC_015572:2186394:220860622086062209097492Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein4e-1477
NC_007484:667879:677870677870678430561Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein1e-1168.2
NC_016830:3869572:392531839253183925527210Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-0961.2