Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3537994 Citrobacter rodentium ICC168, complete genome

Start: 3537994, End: 3538320, Length: 327

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:3328844:335158333515833351894312Enterobacter aerogenes EA1509E, complete genomeFIG01045568: hypothetical protein5e-38155
NC_009708:4182460:418974241897424190050309Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-1478.2
NC_012912:483390:508788508788509165378Dickeya zeae Ech1591, complete genomehypothetical protein3e-1373.9
NC_012691:2614603:266246426624642662841378Tolumonas auensis DSM 9187, complete genomehypothetical protein3e-1373.6
NC_010170:1498253:153737015373701537753384Bordetella petrii, complete genomehypothetical protein4e-1373.6
NC_009138:1974935:202203020220302022410381Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide6e-1372.8
NC_005126:1223042:125186012518601252135276Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-1168.6
NC_016830:3869572:391683139168313917163333Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein7e-1165.9
NC_014228:3534378:353863435386343538963330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1065.5
NC_014228:3391500:342778334277833428112330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-1165.5
NC_013892:3278647:330470633047063305032327Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein9e-1165.5
NC_008344:49039:918229182292193372Nitrosomonas eutropha C91, complete genomehypothetical protein1e-1065.1
NC_015566:316340:335541335541335876336Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-1064.7
NC_015567:313035:335706335706336041336Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-1064.7
NC_004547:611178:630094630094630414321Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-1064.7
NC_009832:4521585:455079545507954551124330Serratia proteamaculans 568, complete genomeplasmid conserved hypothetical protein RAQPRD4e-1063.5
NC_013892:1483000:149300114930011493330330Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-1063.5
NC_003919:2639080:265462926546292655087459Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein5e-1063.2
NC_008463:5313527:533224153322415332600360Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative candidate type III effector Hop protein5e-1063.2
NC_011901:2983555:299367429936742994024351Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein7e-1062.8
NC_009832:358291:381523381523381855333Serratia proteamaculans 568, complete genomeplasmid conserved hypothetical protein RAQPRD2e-0960.8
NC_004129:5373886:543045854304585430811354Pseudomonas fluorescens Pf-5, complete genomeconserved hypothetical protein TIGR016903e-0960.8
NC_009656:4527457:463650946365094636847339Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-0960.8
NC_014029:331919:365919365919366248330Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-0960.5
NC_018080:5091772:516156551615655161858294Pseudomonas aeruginosa DK2 chromosome, complete genometype III effector Hop protein5e-0960.1
NC_012560:3667177:368687836868783687234357Azotobacter vinelandii DJ, complete genomePlasmid hypothetical protein, RAQPRD1e-0858.2
NC_021150:3667176:368687736868773687233357Azotobacter vinelandii CA6, complete genomePlasmid hypothetical protein, RAQPRD1e-0858.2
NC_007005:1636875:163790716379071638269363Pseudomonas syringae pv. syringae B728a, complete genomePlasmid conserved hypothetical protein, RAQPRD1e-0755.1
NC_008825:2525380:255245025524502552797348Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-0754.7
NC_004578:934867:938532938532938897366Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-0753.9
NC_015422:1876102:189598418959841896349366Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein5e-0753.1
NC_006513:1379735:144300314430031443371369Azoarcus sp. EbN1, complete genomehypothetical protein1e-0652
NC_011662:1041725:104579810457981046163366Thauera sp. MZ1T, complete genomeplasmid conserved hypothetical protein RAQPRD3e-0650.4