Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3537420 Citrobacter rodentium ICC168, complete genome

Start: 3537420, End: 3537746, Length: 327

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012731:600518:606568606568606885318Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein9e-36148
NC_020181:3328844:335214333521433352373231Enterobacter aerogenes EA1509E, complete genomeFIG01047748: hypothetical protein3e-27120
NC_011992:1213726:123243912324391232798360Acidovorax ebreus TPSY, complete genomehypothetical protein1e-22105
NC_010170:1498253:153799415379941538359366Bordetella petrii, complete genomehypothetical protein1e-22105
NC_011901:2983555:299427329942732994641369Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein6e-22102
NC_015422:1876102:189660818966081896976369Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element membrane protein4e-21100
NC_011662:1041725:104517110451711045539369Thauera sp. MZ1T, complete genomehypothetical protein4e-21100
NC_009138:1974935:202265720226572023016360Herminiimonas arsenicoxydans, complete genomehypothetical protein8e-2199
NC_015379:2417312:244640824464082446767360Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-2098.6
NC_006513:1379735:144237614423761442744369Azoarcus sp. EbN1, complete genomehypothetical protein1e-2098.6
NC_012691:2614603:266308826630882663450363Tolumonas auensis DSM 9187, complete genomehypothetical protein5e-2096.3
NC_012912:483390:508180508180508539360Dickeya zeae Ech1591, complete genomehypothetical protein7e-2095.9
NC_008463:5313527:533285453328545333210357Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein6e-1992.8
NC_003919:2639080:265532326553232655709387Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-1788.6
NC_016830:3869572:391620639162063916577372Pseudomonas fluorescens F113 chromosome, complete genomeintegrating conjugative element membrane protein2e-1787.8
NC_021150:3667176:368748836874883687832345Azotobacter vinelandii CA6, complete genomehypothetical protein3e-1683.6
NC_012560:3667177:368748936874893687833345Azotobacter vinelandii DJ, complete genomehypothetical protein3e-1683.6
NC_004578:934867:937908937908938276369Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-1683.2
NC_007005:1636875:163728316372831637651369Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein9e-1682.4
NC_018080:5091772:516211251621125162468357Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-1477
NC_009656:4527457:463710146371014637457357Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-1475.9
NC_008344:49039:912189121891577360Nitrosomonas eutropha C91, complete genomehypothetical protein2e-1374.7
NC_004129:5373886:543106254310625431400339Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-1373.6
NC_009708:4182460:418913141891314189481351Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-1167.4
NC_005126:1223042:125239312523931252794402Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein6e-1166.2
NC_014029:331919:366559366559366924366Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-1064.7
NC_009832:4521585:455013245501324550497366Serratia proteamaculans 568, complete genomehypothetical protein4e-1063.5
NC_015566:316340:336174336174336539366Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element membrane protein4e-0960.1
NC_013892:1483000:149235514923551492663309Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-0652
NC_014228:3534378:353930135393013539609309Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-0650.8
NC_013892:3278647:330530433053043305681378Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-0650.1