Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3535623 Citrobacter rodentium ICC168, complete genome

Start: 3535623, End: 3536411, Length: 789

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:3534378:354064435406443541480837Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-69261
NC_013892:1483000:149048414904841491320837Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-67256
NC_013892:3278647:330671633067163307552837Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-67254
NC_012731:600518:604793604793605623831Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein7e-67253
NC_008463:5313527:533426053342605335144885Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein8e-65246
NC_009708:4182460:418723441872344188100867Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-64246
NC_009656:4527457:463850746385074639391885Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-64245
NC_018080:5091772:516351851635185164402885Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein5e-64244
NC_016830:3869572:391433839143383915150813Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-63242
NC_012660:2045398:210663621066362107448813Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-62238
NC_014029:331919:367966367966368877912Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-61236
NC_010554:2789722:281956128195612820457897Proteus mirabilis HI4320, complete genomehypothetical protein2e-61235
NC_015422:1876102:189808518980851898999915Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein5e-61234
NC_015566:316340:337581337581338492912Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein3e-60231
NC_011901:2983555:299573029957302996617888Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein7e-60230
NC_010170:1498253:153946815394681540400933Bordetella petrii, complete genomeputative secreted protein9e-60230
NC_004578:934867:933947933947934870924Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-59228
NC_009832:4521585:454817345481734549090918Serratia proteamaculans 568, complete genomehypothetical protein3e-59228
NC_011662:1041725:104314810431481044062915Thauera sp. MZ1T, complete genomehypothetical protein3e-58224
NC_011662:1017933:104314810431481044062915Thauera sp. MZ1T, complete genomehypothetical protein3e-58224
NC_011992:1213726:123041312304131231330918Acidovorax ebreus TPSY, complete genomeputative secreted protein4e-58224
NC_009138:1974935:202412220241222025039918Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide5e-58224
NC_006513:1379735:144033814403381441255918Azoarcus sp. EbN1, complete genomehypothetical protein8e-58223
NC_015726:2862500:288322528832252884145921Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein8e-58223
NC_004547:611178:632045632045632971927Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-57223
NC_015379:2417312:244443624444362445323888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein2e-57222
NC_012912:483390:506202506202507095894Dickeya zeae Ech1591, complete genomeputative signal peptide3e-56218
NC_021150:3667176:368888736888873689810924Azotobacter vinelandii CA6, complete genomehypothetical protein2e-55215
NC_012560:3667177:368888836888883689811924Azotobacter vinelandii DJ, complete genomehypothetical protein2e-55215
NC_008344:49039:892328923290134903Nitrosomonas eutropha C91, complete genomeputative secreted protein4e-55214
NC_012691:2614603:266453326645332665435903Tolumonas auensis DSM 9187, complete genomeputative secreted protein2e-53209
NC_003919:2639080:265683626568362657828993Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein3e-53208
NC_004129:5373886:543243754324375433348912Pseudomonas fluorescens Pf-5, complete genomehypothetical protein6e-53207
NC_015572:2186394:222013022201302220981852Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein1e-29130