Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3518153 Citrobacter rodentium ICC168, complete genome

Start: 3518153, End: 3519772, Length: 1620

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:3056774:3073338307333830749571620Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0961
NC_011149:4677412:4680855468085546821711317Salmonella enterica subsp. enterica serovar Agona str. SL483,0686
NC_009792:3245368:3263530326353032647921263Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-135483
NC_012731:560199:5776945776945792861593Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-117424
NC_009648:5119271:5133416513341651350051590Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-116419
NC_006513:1379735:1423016142301614248301815Azoarcus sp. EbN1, complete genomehypothetical protein3e-113409
NC_012660:2045398:2091920209192020936441725Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein7e-112404
NC_015740:1291739:1291739129173912935951857Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-111402
NC_007492:3462929:3471454347145434731811728Pseudomonas fluorescens PfO-1, complete genomehypothetical protein7e-111401
NC_012912:483390:4914434914434932421800Dickeya zeae Ech1591, complete genomeRelaxase1e-110400
NC_008825:2564965:2568977256897725708151839Methylibium petroleiphilum PM1, complete genomehypothetical protein1e-110400
NC_016830:3869572:3883326388332638850501725Pseudomonas fluorescens F113 chromosome, complete genomerelaxase9e-111400
NC_011662:1017933:1022284102228410241341851Thauera sp. MZ1T, complete genomeRelaxase2e-110399
NC_015726:2862500:2869564286956428714081845Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein6e-108391
NC_013421:1744928:1754222175422217560031782Pectobacterium wasabiae WPP163, complete genomeRelaxase8e-107387
NC_015379:2417312:2429114242911424309311818Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-106387
NC_012913:1041969:1061129106112910630151887Aggregatibacter aphrophilus NJ8700, complete genomerelaxase6e-99362
NC_010501:3671517:3679488367948836811971710Pseudomonas putida W619, complete genomeRelaxase1e-98360
NC_017986:409899:4169414169414186681728Pseudomonas putida ND6 chromosome, complete genomerelaxase9e-98357
NC_009512:3334579:3342578334257833443651788Pseudomonas putida F1, complete genomeRelaxase1e-97357
NC_015733:2581324:2624808262480826265351728Pseudomonas putida S16 chromosome, complete genomerelaxase9e-96351
NC_008782:1308007:1323801132380113256841884Acidovorax sp. JS42, complete genomeRelaxase9e-87321
NC_010170:1551923:1557786155778615596331848Bordetella petrii, complete genomeputative helicase7e-86318
NC_004578:895019:9009889009889029161929Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-85317
NC_007005:1605000:1609367160936716112711905Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF1528:Relaxase9e-85314
NC_012691:2614603:2677917267791726797731857Tolumonas auensis DSM 9187, complete genomeRelaxase2e-84313
NC_014910:4207227:4208814420881442106761863Alicycliphilus denitrificans BC chromosome, complete genomerelaxase2e-84313
NC_004129:5481629:5489951548995154918371887Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-84313
NC_010002:4572573:4579413457941345812661854Delftia acidovorans SPH-1, complete genomeRelaxase4e-84312
NC_002488:1638946:1671676167167616735261851Xylella fastidiosa 9a5c, complete genomehypothetical protein4e-83309
NC_010170:1152131:1155741115574111576031863Bordetella petrii, complete genomeputative helicase9e-83308
NC_010688:2850164:2856463285646328583911929Xanthomonas campestris pv. campestris, complete genomehypothetical protein5e-82305
NC_008344:49039:6932869328711931866Nitrosomonas eutropha C91, complete genomeRelaxase7e-82305
NC_014640:1179382:1185130118513011870071878Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein4e-81302
NC_009656:4527457:4570189457018945721081920Pseudomonas aeruginosa PA7 chromosome, complete genomerelaxase8e-80298
NC_009656:4527457:4655680465568046576111932Pseudomonas aeruginosa PA7 chromosome, complete genomerelaxase2e-79296
NC_021150:3698696:3718383371838337202781896Azotobacter vinelandii CA6, complete genomeRelaxase-related protein2e-78293
NC_012560:3698697:3718384371838437202791896Azotobacter vinelandii DJ, complete genomeRelaxase-related protein2e-78293
NC_014532:3596097:3630268363026836321421875Halomonas elongata DSM 2581, complete genomerelaxase5e-71269
NC_007086:1224867:1249163124916312501851023Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-67256
NC_003902:3666544:3697611369761136986331023Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein3e-67256
NC_007005:830467:838293838293839249957Pseudomonas syringae pv. syringae B728a, complete genomeRelaxase5e-65249
NC_009792:3245368:326495832649583265317360Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-64246
NC_018691:2214464:2216028221602822178421815Alcanivorax dieselolei B5 chromosome, complete genomeRelaxase5e-51202
NC_008739:41793:5382653826557001875Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequenceRelaxase1e-48194
NC_013416:820989:826945826945827487543Aggregatibacter actinomycetemcomitans D11S-1, complete genomerelaxase6e-39162
NC_009434:3611738:3686311368631136875551245Pseudomonas stutzeri A1501, complete genomeHD-superfamily hydrolase6e-34145
NC_014029:331919:3999813999814016901710Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-27123
NC_016616:2699350:2732315273231527343001986Dechlorosoma suillum PS chromosome, complete genomeputative HD superfamily hydrolase6e-27122
NC_012779:346998:3771273771273787191593Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-25118
NC_004631:4494000:4509837450983745114261590Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-25117
NC_003198:4513900:4527028452702845286171590Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-25117
NC_016832:4482437:4498105449810544996941590Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-25117
NC_009832:4482500:4487979448797944896611683Serratia proteamaculans 568, complete genomeRelaxase2e-25117
NC_012125:4559990:4575681457568145772461566Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-25116
NC_016845:4498097:4504028450402845053171290Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-25116
NC_009832:426993:4482924482924500041713Serratia proteamaculans 568, complete genomeRelaxase6e-25115
NC_009832:4564752:4573178457317845748871710Serratia proteamaculans 568, complete genomeRelaxase8e-24112
NC_012880:3529017:3551393355139335528291437Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF15288e-22105
NC_009801:3374501:3374501337450133761561656Escherichia coli E24377A, complete genomehelicase/Zfx / Zfy transcription activation region domain protein2e-21104
NC_007005:830467:837344837344838102759Pseudomonas syringae pv. syringae B728a, complete genome9e-21102
NC_005126:1315474:1348802134880213503341533Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-21102
NC_013421:701005:7426947426947441511458Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF15282e-1997.8
NC_011035:829945:8878478878478903992553Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeTraI2e-1894.4
NC_014228:3391500:339158733915873392480894Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-1894
NC_013892:1503162:151686915168691517762894Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-1892.4
NC_014228:2270000:231586323158632316630768Xenorhabdus nematophila ATCC 19061, complete genome8e-1685.9
NC_004547:667988:6856966856966872941599Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-1584.7
NC_008463:4566976:458907845890784589455378Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein9e-1582
NC_010554:2646806:2702478270247827046282151Proteus mirabilis HI4320, complete genomeplasmid conjugative relaxase2e-1480.9
NC_005773:4282840:4312613431261343141211509Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein4e-1480.1
NC_012214:537000:5558525558525573541503Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein8e-1479
NC_016816:4129299:4129299412929941308431545Pantoea ananatis LMG 5342, complete genomeputative helicase/relaxase1e-1378.6
NC_010554:2789722:2795085279508527966771593Proteus mirabilis HI4320, complete genomehelicase1e-1378.2
NC_014394:993465:9934659934659954111947Gallionella capsiferriformans ES-2 chromosome, complete genomeRelaxase2e-1377.4
NC_016513:1126263:113454411345441134873330Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completerelaxase5e-1273.2
NC_007508:3865000:387247438724743872746273Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein7e-1272.8
NC_015850:2048251:2063119206311920653532235Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein4e-1170.1
NC_013971:3117000:3117124311712431185631440Erwinia amylovora ATCC 49946 chromosome, complete genomemembrane protein8e-0755.8
NC_007950:206474:2241102241102259451836Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein8e-0755.8