Pre_GI: BLASTP Hits

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Query: NC_013716:3109700:3144281 Citrobacter rodentium ICC168, complete genome

Start: 3144281, End: 3145477, Length: 1197

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:5319497:5331458533145853326541197Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspG0633
NC_013353:3669500:3711228371122837124241197Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspG5e-180630
AP010958:3669500:3711228371122837124241197Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspG5e-180630
NC_013364:3701895:3717302371730237184981197Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspG3e-176618
NC_011601:4096427:4135193413519341363891197Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeLEE-encoded effector EspG5e-175613
NC_002655:4653160:4690403469040346915991197Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-174612
NC_002695:4584177:4621420462142046226161197Escherichia coli O157:H7 str. Sakai, complete genomeEspG1e-174612
NC_013008:4643825:4680565468056546817611197Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III effector1e-174612
NC_013941:4470932:4508913450891345101091197Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-174612
NC_011353:4688000:4724575472457547257201146Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein EspG2e-170598
NC_011601:2998326:3009981300998130111531173Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector EspG-like protein1e-89330