Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:3109700:3129021 Citrobacter rodentium ICC168, complete genome

Start: 3129021, End: 3129791, Length: 771

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:4714478:477007747700774770859783Pectobacterium wasabiae WPP163, complete genomeprotein tyrosine/serine phosphatase3e-65248
NC_012912:4428111:444912944491294449911783Dickeya zeae Ech1591, complete genomeprotein tyrosine/serine phosphatase4e-63241
NC_010610:2013659:204867120486712049468798Lactobacillus fermentum IFO 3956, complete genomeprotein-tyrosine phosphatase5e-26117
NC_002973:1846000:185209818520981852994897Listeria monocytogenes str. 4b F2365, complete genomeprotein-tyrosine phosphatase, putative7e-25114
NC_016894:3114394:3114394311439431155001107Acetobacterium woodii DSM 1030 chromosome, complete genomeputative tyrosine/serine phosphatase2e-22105
NC_018720:176306:195302195302196054753Bifidobacterium asteroides PRL2011 chromosome, complete genomeprotein tyrosine/serine phosphatase3e-1995.9
NC_011992:3375929:338034033803403381134795Acidovorax ebreus TPSY, complete genomeprotein tyrosine/serine phosphatase8e-1890.9
NC_013510:2782240:279403427940342794822789Thermomonospora curvata DSM 43183, complete genomeprotein tyrosine/serine phosphatase6e-1684.3
NC_015656:454500:460040460040460768729Frankia symbiont of Datisca glomerata chromosome, complete genomeprotein tyrosine/serine phosphatase8e-1270.9
NC_013526:835117:846992846992847741750Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeprotein tyrosine/serine phosphatase9e-1270.9
NC_015656:1876627:187746418774641878189726Frankia symbiont of Datisca glomerata chromosome, complete genomeprotein tyrosine/serine phosphatase2e-1169.3
NC_012796:3374911:3404011340401134059841974Desulfovibrio magneticus RS-1, complete genomeputative protein-tyrosine phosphatase3e-1168.9
NC_016109:4645905:464844546484454649191747Kitasatospora setae KM-6054, complete genomeputative tyrosine phosphatase3e-0962.4
NC_007333:1677406:167855016785501679458909Thermobifida fusca YX, complete genomesimilar to Protein tyrosine/serine phosphatase1e-0653.5
NC_013124:1784117:180511018051101805829720Acidimicrobium ferrooxidans DSM 10331, complete genomeprotein tyrosine/serine phosphatase1e-0653.5