Pre_GI: BLASTP Hits

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Query: NC_013716:3109700:3121191 Citrobacter rodentium ICC168, complete genome

Start: 3121191, End: 3121478, Length: 288

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:258746:269020269020269310291Escherichia coli S88 chromosome, complete genomehypothetical protein6e-0649.7
NC_008563:258725:268999268999269289291Escherichia coli APEC O1, complete genomehypothetical protein6e-0649.7
NC_007946:258747:269021269021269311291Escherichia coli UTI89, complete genomehypothetical protein6e-0649.7
NC_008253:257059:268346268346268636291Escherichia coli 536, complete genomehypothetical protein6e-0649.7