Pre_GI: BLASTP Hits

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Query: NC_013716:1918664:1938386 Citrobacter rodentium ICC168, complete genome

Start: 1938386, End: 1939018, Length: 633

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:2684046:269962426996242700253630Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-25116
NC_013850:2685835:270442027044202705049630Klebsiella variicola At-22 chromosome, complete genomeputative transcriptional regulator, Crp/Fnr family1e-25116
NC_011283:2684046:269888626988862699557672Klebsiella pneumoniae 342 chromosome, complete genomecyclic nucleotide-binding domain-containing protein2e-2099
NC_013850:2685835:270369427036942704353660Klebsiella variicola At-22 chromosome, complete genomeputative transcriptional regulator, Crp/Fnr family4e-2098.2
NC_013716:1918664:193766919376691938331663Citrobacter rodentium ICC168, complete genomehypothetical protein7e-1890.5
NC_009436:1141376:116916211691621169770609Enterobacter sp. 638, complete genomeinner membrane protein3e-1478.6
NC_016818:2542295:255512525551252555763639Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completecAMP-binding protein5e-1064.3
NC_015761:1970042:199573219957321996418687Salmonella bongori NCTC 12419, complete genomehypothetical protein5e-1064.3
NC_020260:440000:457857457857458516660Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-0962
NC_015663:770485:786184786184786876693Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein7e-0960.8
NC_010067:2881448:290341929034192904114696Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0858.5
NC_016612:2223357:224294422429442243636693Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-0858.2
NC_014121:4299500:430397243039724304601630Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeCRP/FNR family transcriptional regulator5e-0857.8
NC_020063:2343813:234899123489912349620630Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein4e-0754.7