Pre_GI: BLASTP Hits

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Query: NC_013716:1618249:1635854 Citrobacter rodentium ICC168, complete genome

Start: 1635854, End: 1636645, Length: 792

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:2108686:213377421337742134568795Pseudomonas putida F1, complete genomeprotein of unknown function DUF12643e-79295
NC_017986:4790482:483338548333854834056672Pseudomonas putida ND6 chromosome, complete genomehypothetical protein5e-75280
NC_007614:1633332:163616716361671636979813Nitrosospira multiformis ATCC 25196 chromosome 1, completeProtein of unknown function DUF12641e-45183
NC_007005:1636875:167769216776921678069378Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein9e-25114
NC_004578:5192110:521824752182475218624378Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein9e-25114
NC_017986:4790482:482335148233514823473123Pseudomonas putida ND6 chromosome, complete genomelipoprotein5e-1065.1