Pre_GI: BLASTP Hits

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Query: NC_013716:1618249:1635527 Citrobacter rodentium ICC168, complete genome

Start: 1635527, End: 1635805, Length: 279

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:2230000:224026922402692240535267Enterobacteriaceae bacterium strain FGI 57, complete genomeBiofilm development protein YmgB/AriR2e-1994.7
NC_011750:1978801:198739319873931987659267Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-1786.3
NC_010498:1995500:200507620050762005342267Escherichia coli SMS-3-5, complete genomehypothetical protein5e-1786.3
NC_008563:1217804:123000112300011230267267Escherichia coli APEC O1, complete genomehypothetical protein6e-1785.9
NC_004431:1443968:145615914561591456425267Escherichia coli CFT073, complete genomeHypothetical protein ymgB6e-1785.9
NC_008253:1228485:123934312393431239609267Escherichia coli 536, complete genomehypothetical protein YmgB6e-1785.9
NC_011601:1315746:132543213254321325698267Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-1785.9
NC_011742:1221416:123361312336131233879267Escherichia coli S88 chromosome, complete genomehypothetical protein6e-1785.9
NC_011745:1287714:129867412986741298940267Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-1785.9
NC_011751:1446073:146263414626341462900267Escherichia coli UMN026 chromosome, complete genomehypothetical protein8e-1785.5
NC_013941:1460144:146863414686341468900267Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein8e-1785.5
AP010958:1339263:134980813498081350074267Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-1684.3
NC_011748:1300863:131140813114081311674267Escherichia coli 55989, complete genomehypothetical protein2e-1684.3
CU928160:1232510:124305512430551243321267Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-1684.3
NC_010473:1245284:125583312558331256099267Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-1684.3
CP002516:2786000:279636227963622796628267Escherichia coli KO11, complete genomehypothetical protein2e-1684.3
NC_009801:1296488:130703313070331307299267Escherichia coli E24377A, complete genomehypothetical protein2e-1684.3
NC_000913:1188999:121559212155921215858267Escherichia coli K12, complete genomehypothetical protein2e-1684.3
CP002185:1298675:130922013092201309486267Escherichia coli W, complete genomehypothetical protein2e-1684.3
CU928145:1300863:131140813114081311674267Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-1684.3
AC_000091:1191353:121794612179461218212267Escherichia coli W3110 DNA, complete genomehypothetical protein2e-1684.3
NC_010468:2699000:270973727097372710003267Escherichia coli ATCC 8739, complete genomehypothetical protein2e-1684.3
NC_009800:1254409:126481812648181265084267Escherichia coli HS, complete genomehypothetical protein2e-1684.3
NC_016902:2786000:279636227963622796628267Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-1684.3
NC_013364:1477248:151121015112101511476267Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-1684.3
NC_013361:1634226:164339716433971643663267Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-1684.3
NC_013353:1339263:134980813498081350074267Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-1684.3
NC_012967:1205985:121653012165301216796267Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-1684.3
NC_012947:2566754:257759125775912577857267Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-1684.3
NC_012759:1093764:110431311043131104579267Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-1684.3
NC_011741:1232510:124305512430551243321267Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-1684.3
NC_011415:1273551:128409512840951284361267Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1684.3
NC_013956:4627890:464429146442914644554264Pantoea ananatis LMG 20103 chromosome, complete genomeYmgB2e-1580.9
NC_014842:19411:207442074420998255Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceregulatory protein AriR2e-1271.2
NC_014839:68308:934969349693750255Pantoea sp. At-9b plasmid pPAT9B02, complete sequencehypothetical protein2e-1167.4
NC_010694:2138000:217302421730242173467444Erwinia tasmaniensis, complete genomehypothetical protein4e-0753.5