Pre_GI: BLASTP Hits

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Query: NC_013716:1618249:1634895 Citrobacter rodentium ICC168, complete genome

Start: 1634895, End: 1635134, Length: 240

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:1287714:129809412980941298330237Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-24110
NC_010468:2699000:271034727103472710583237Escherichia coli ATCC 8739, complete genomehypothetical protein2e-24110
NC_011750:1978801:198800319880031988239237Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-24110
NC_004431:1443968:145557914555791455815237Escherichia coli CFT073, complete genomeHypothetical protein ycgZ2e-24110
NC_008253:1228485:123876312387631238999237Escherichia coli 536, complete genomehypothetical protein YcgZ2e-24110
NC_007946:1280508:129212512921251292361237Escherichia coli UTI89, complete genomehypothetical protein YcgZ2e-24110
CU928160:1232510:124247512424751242711237Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-24110
NC_011741:1232510:124247512424751242711237Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-24110
NC_011742:1221416:123303312330331233269237Escherichia coli S88 chromosome, complete genomehypothetical protein2e-24110
NC_020063:2230000:224097222409722241223252Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein3e-24110
NC_011751:1446073:146205414620541462290237Escherichia coli UMN026 chromosome, complete genomehypothetical protein6e-24109
NC_013941:1460144:146805414680541468290237Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-24109
NC_011748:1300863:131082813108281311064237Escherichia coli 55989, complete genomehypothetical protein2e-23107
CP002185:1298675:130864013086401308876237Escherichia coli W, complete genomeconserved hypothetical protein2e-23107
CU928145:1300863:131082813108281311064237Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-23107
AP010958:1339263:134922813492281349464237Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-23107
CP002516:2786000:279697227969722797208237Escherichia coli KO11, complete genomehypothetical protein2e-23107
NC_013353:1339263:134922813492281349464237Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-23107
NC_013361:1634226:164281716428171643053237Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-23107
NC_013364:1477248:151063015106301510866237Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-23107
NC_016902:2786000:279697227969722797208237Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-23107
NC_011601:1315746:132485213248521325088237Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-23106
NC_011415:1273551:128351612835161283764249Escherichia coli SE11 chromosome, complete genomehypothetical protein9e-23105
NC_010473:1245284:125525312552531255489237Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein5e-22103
NC_000913:1188999:121501212150121215248237Escherichia coli K12, complete genomehypothetical protein5e-22103
AC_000091:1191353:121736612173661217602237Escherichia coli W3110 DNA, complete genomehypothetical protein5e-22103
NC_012759:1093764:110373311037331103969237Escherichia coli BW2952 chromosome, complete genomehypothetical protein5e-22103
NC_012947:2566754:257820125782012578437237Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein5e-22103
NC_012967:1205985:121595012159501216186237Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein5e-22103
NC_014842:19411:200102001020252243Pantoea sp. At-9b plasmid pPAT9B05, complete sequencehypothetical protein7e-1889.4
NC_014839:68308:927449274492986243Pantoea sp. At-9b plasmid pPAT9B02, complete sequencehypothetical protein8e-1889
NC_013961:1622616:163074716307471630992246Erwinia amylovora, complete genomeUncharacterized protein ycgZ1e-1788.6
NC_013971:1660144:166827516682751668520246Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein1e-1788.6
NC_013956:4627890:464514546451454645390246Pantoea ananatis LMG 20103 chromosome, complete genomeYcgZ2e-1787.8
NC_010694:2138000:217229421722942172539246Erwinia tasmaniensis, complete genomeConserved hypothetical protein YcgZ2e-1787.8
NC_012214:2221702:226019322601932260438246Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein YcgZ5e-1786.7