Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:1618249:1632448 Citrobacter rodentium ICC168, complete genome

Start: 1632448, End: 1633206, Length: 759

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:2230000:224297722429772243729753Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator4e-84311
NC_011601:1315746:132239113223911323122732Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional regulator1e-78292
CU928145:1300863:130836713083671309098732Escherichia coli 55989 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-78290
CP002185:1298675:130617913061791306910732Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator5e-78290
NC_010468:2699000:271231327123132713044732Escherichia coli ATCC 8739, complete genometranscriptional regulator, MerR family5e-78290
AC_000091:1191353:121490512149051215636732Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator5e-78290
NC_013941:1460144:146559714655971466328732Escherichia coli O55:H7 str. CB9615 chromosome, complete genometranscriptional regulator mlrA6e-78290
NC_010498:1995500:200765220076522008383732Escherichia coli SMS-3-5, complete genometranscriptional regulator mlrA6e-78290
NC_011750:1978801:198996919899691990700732Escherichia coli IAI39 chromosome, complete genomeputative DNA-binding transcriptional regulator6e-78290
NC_008253:1228485:123630212363021237033732Escherichia coli 536, complete genomehypothetical transcriptional regulator YcgE7e-78290
NC_004431:1443968:145311814531181453849732Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator ycgE7e-78290
NC_011745:1287714:129563412956341296365732Escherichia coli ED1a chromosome, complete genomeputative DNA-binding transcriptional regulator8e-78290
NC_011742:1221416:123057212305721231303732Escherichia coli S88 chromosome, complete genomeDNA-binding transcriptional regulator8e-78290
NC_007946:1280508:128966412896641290395732Escherichia coli UTI89, complete genomehypothetical transcriptional regulator YcgE8e-78290
NC_008563:1217804:122696012269601227691732Escherichia coli APEC O1, complete genomeputative transcriptional regulator8e-78290
NC_000913:1188999:121255112125511213282732Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator5e-78290
NC_011748:1300863:130836713083671309098732Escherichia coli 55989, complete genomeputative DNA-binding transcriptional regulator5e-78290
CU928160:1232510:124001412400141240745732Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-78290
NC_016902:2786000:279893827989382799669732Escherichia coli KO11FL chromosome, complete genomeMerR family transcriptional regulator5e-78290
NC_013364:1477248:150816915081691508900732Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator5e-78290
NC_013361:1634226:164035616403561641087732Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator5e-78290
NC_013353:1339263:134676713467671347498732Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional regulator5e-78290
NC_012967:1205985:121348912134891214220732Escherichia coli B str. REL606 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-78290
NC_012947:2566754:258016725801672580898732Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeMerR family transcriptional regulator5e-78290
NC_012759:1093764:110127211012721102003732Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-78290
NC_011741:1232510:124001412400141240745732Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-78290
NC_010658:1193225:120299012029901203721732Shigella boydii CDC 3083-94, complete genometranscriptional regulator mlrA5e-78290
AP010958:1339263:134676713467671347498732Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted DNA-binding transcriptional regulator5e-78290
NC_009800:1254409:126054612605461261277732Escherichia coli HS, complete genometranscriptional regulator mlrA5e-78290
NC_010473:1245284:125279212527921253523732Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator5e-78290
CP002516:2786000:279893827989382799669732Escherichia coli KO11, complete genometranscriptional regulator, MerR family5e-78290
NC_009801:1296488:130399213039921304723732Escherichia coli E24377A, complete genometranscriptional regulator mlrA homolog1e-77289
NC_011415:1273551:128105512810551281786732Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator1e-77289
NC_011751:1446073:145959314595931460324732Escherichia coli UMN026 chromosome, complete genomeputative DNA-binding transcriptional regulator1e-77289
NC_020260:1111130:111503111150311115774744Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-53209
NC_009778:1070000:107294310729431073686744Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-53209
NC_011294:1723852:175318617531861753914729Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator1e-36153
NC_011274:1763676:179301017930101793738729Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator3e-36152
NC_016831:1236786:124069412406941241422729Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator3e-36152
NC_006905:1509093:151300315130031513731729Salmonella enterica subsp. enterica serovar Choleraesuis strputative regulatory proteins, merR family4e-36151
NC_012125:2360815:239014923901492390877729Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator4e-36151
NC_011094:1435347:143922714392271439955729Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, MerR family protein8e-36150
NC_006511:1506915:153630915363091537037729Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator8e-36150
NC_010102:1616530:164592516459251646653729Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-36150
NC_004631:1325817:132972713297271330455729Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator8e-36150
NC_016832:1324820:132870013287001329428729Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transcriptional regulator, MerR8e-36150
NC_011080:1470794:147470114747011475429729Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, MerR family protein7e-36150
NC_011147:1502096:153149015314901532218729Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator6e-36150
NC_016810:1428201:143211214321121432840729Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-35149
NC_016856:1481325:148523614852361485964729Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein2e-35149
NC_016857:1428201:143211214321121432840729Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74MerR family transcriptional regulator2e-35149
NC_016863:1429516:143342714334271434155729Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein2e-35149
NC_017046:1428272:143218314321831432911729Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator2e-35149
NC_003197:1471349:147526014752601475988729Salmonella typhimurium LT2, complete genomeputative regulatory protein2e-35149
NC_016860:1469066:147294714729471473675729Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein2e-35149
NC_011083:1476894:148077514807751481503729Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, MerR family protein1e-35149
NC_006856:95830:119643119643120368726Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator9e-35147
NC_015968:74124:788537885379578726Enterobacter asburiae LF7a chromosome, complete genomeMerR family transcriptional regulator1e-32139
NC_015761:1181186:122550712255071226355849Salmonella bongori NCTC 12419, complete genometranscriptional regulator8e-22103
NC_011205:1852665:188225618822561882726471Salmonella enterica subsp. enterica serovar Dublin str. CT_020218539e-1373.9
NC_011205:1852665:188199918819991882241243Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-1273.6
NC_013960:243884:264587264587265531945Nitrosococcus halophilus Nc4 chromosome, complete genomeregulatory protein MerR4e-1272
NC_008027:896000:917822917822918691870Pseudomonas entomophila L48, complete genometranscriptional regulator, MerR family3e-0962.4
NC_014561:153143:551455146278765Pantoea vagans C9-1 plasmid pPag1, complete sequenceHTH-type transcriptional regulator mlrA2e-0755.8