Pre_GI: BLASTP Hits

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Query: NC_013716:1618249:1631067 Citrobacter rodentium ICC168, complete genome

Start: 1631067, End: 1632443, Length: 1377

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021066:1393750:1413020141302014144261407Raoultella ornithinolytica B6, complete genomeglycoside hydrolase0692
NC_020063:2230000:2269170226917022704861317Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein0687
NC_008258:1750964:1772792177279217741111320Shigella flexneri 5 str. 8401, complete genomehypothetical protein0667
NC_007613:1533024:1558078155807815593971320Shigella boydii Sb227, complete genomehypothetical protein0665
NC_012917:2362725:2367221236722123685161296Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein0646
NC_009792:1479779:1483543148354314846401098Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-179629
NC_006155:3040769:3040769304076930420731305Yersinia pseudotuberculosis IP 32953, complete genomeputative lipoprotein6e-156550
NC_003143:2849377:2849377284937728506601284Yersinia pestis CO92, complete genomeputative lipoprotein4e-155548
NC_010159:1861465:1861465186146518627481284Yersinia pestis Angola, complete genomeputative lipoprotein4e-155548
NC_004088:1801819:1821509182150918227921284Yersinia pestis KIM, complete genomehypothetical protein4e-155548
NC_008149:2411161:2411161241116124124441284Yersinia pestis Nepal516, complete genomelipoprotein4e-155548
NC_005810:2613456:2613456261345626147391284Yersinia pestis biovar Microtus str. 91001, complete genomeputative lipoprotein4e-155548
NC_017154:3139614:3159311315931131605941284Yersinia pestis D106004 chromosome, complete genomeputative lipoprotein4e-155548
NC_017160:2740870:2758920275892027602031284Yersinia pestis D182038 chromosome, complete genomeputative lipoprotein4e-155548
NC_017168:2892000:2911776291177629130591284Yersinia pestis A1122 chromosome, complete genomeputative lipoprotein4e-155548
NC_017265:1521276:1542592154259215438751284Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative lipoprotein4e-155548
NC_010465:1724000:1744353174435317456361284Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF1874e-155548
NC_009708:1694685:1712954171295417142371284Yersinia pseudotuberculosis IP 31758 chromosome, complete genomelipoprotein4e-155548
NC_014310:811977:8319158319158332581344Ralstonia solanacearum PSI07 megaplasmid, complete sequencelipoprotein yddw8e-133474
NC_003296:941920:9556109556109569531344Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-132472
NC_013526:65495:7874678746803501605Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeprotein of unknown function DUF1872e-88327
NC_013510:2782240:2788014278801427896121599Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF1878e-78291
NC_014210:4188448:4208888420888842105311644Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF1873e-77289
NC_014632:11925:1444814448156621215Ilyobacter polytropus DSM 2926 chromosome, complete genomehypothetical protein1e-68260
NC_016776:3714642:3741395374139537429031509Bacteroides fragilis 638R, complete genomehypothetical protein9e-67254
NC_006347:3760447:3787198378719837887061509Bacteroides fragilis YCH46, complete genomeputative secreted protein9e-67254
NC_003228:3690596:3695904369590436974121509Bacteroides fragilis NCTC 9343, complete genomehypothetical protein9e-66251
NC_010163:171148:1751911751911769301740Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein2e-48193
NC_010163:171148:1711481711481738682721Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein1e-46187
NC_014150:3139852:3153372315337231551891818Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF1871e-44181
NC_014933:3688000:3692372369237236938291458Bacteroides helcogenes P 36-108 chromosome, complete genomehypothetical protein2e-41170
NC_003228:3690596:3703002370300237044831482Bacteroides fragilis NCTC 9343, complete genomehypothetical protein6e-40165
NC_006347:3760447:3794257379425737957771521Bacteroides fragilis YCH46, complete genomehypothetical protein5e-40165
NC_016776:3714642:3748454374845437499741521Bacteroides fragilis 638R, complete genomehypothetical protein5e-40165
NC_011565:620801:6272686272686287401473Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,hypothetical protein9e-32138
NC_015519:801929:8225588225588258453288Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein2e-1377.4
NC_010546:3583568:3597997359799735992621266Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein7e-1272.4
NC_011884:831905:8514808514808526671188Cyanothece sp. PCC 7425, complete genomeprotein of unknown function DUF1871e-1171.6
NC_006087:28490:290672906729405339Leifsonia xyli subsp. xyli str. CTCB07, complete genomehypothetical protein1e-1171.6
NS_000195:219785:2796292796292810771449Candidatus Cloacamonas acidaminovoranshypothetical protein1e-1171.2
NC_005070:904751:9605559605559616131059Synechococcus sp. WH 8102, complete genomehypothetical protein1e-0758.5
NC_005071:1111605:1135586113558611368181233Prochlorococcus marinus str. MIT 9313, complete genomeDUF1879e-0755.5