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Query: NC_013716:1618249:1630068 Citrobacter rodentium ICC168, complete genome

Start: 1630068, End: 1630403, Length: 336

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014561:76931:894418944189752312Pantoea vagans C9-1 plasmid pPag1, complete sequenceProtein ygiW precursor1e-1581.6
NC_012559:2353236:237050423705042370899396Laribacter hongkongensis HLHK9, complete genomePossible exported protein4e-0856.6
NC_010634:3155741:316264731626473163060414Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-0753.9
NC_006155:3237990:324489632448963245309414Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-0753.5
NC_009708:1497898:150985615098561510269414Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeOB-fold nucleic acid binding domain-containing protein4e-0753.5
NC_008800:1300500:132331813233181323731414Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-0650.8