Pre_GI: BLASTP Hits

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Query: NC_013716:1618249:1628562 Citrobacter rodentium ICC168, complete genome

Start: 1628562, End: 1629866, Length: 1305

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014562:2871765:2886596288659628879001305Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein yjjJ7e-173607
NC_014394:1989418:2005066200506620064091344Gallionella capsiferriformans ES-2 chromosome, complete genomeHipA domain-containing protein2e-115416
NC_013446:2130021:2137229213722921385751347Comamonas testosteroni CNB-2, complete genomehypothetical protein5e-84311
NC_012108:4971086:5008603500860350099401338Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein6e-56218
NC_015711:2050360:2055252205525220565441293Myxococcus fulvus HW-1 chromosome, complete genomeputative DNA-binding transcriptional regulator1e-55217
NC_011071:4000620:4022438402243840238441407Stenotrophomonas maltophilia R551-3, complete genomeHipA domain protein6e-50198
NC_015942:722980:7419857419857434931509Acidithiobacillus ferrivorans SS3 chromosome, complete genomeHipA domain-containing protein1e-40167
NC_010725:3961981:3965622396562239669291308Methylobacterium populi BJ001, complete genomeHipA domain protein2e-0653.9