Pre_GI: BLASTP Hits

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Query: NC_013716:1618249:1620837 Citrobacter rodentium ICC168, complete genome

Start: 1620837, End: 1621598, Length: 762

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:1574036:159300815930081593766759Escherichia coli S88 chromosome, complete genometrans-aconitate 2-methyltransferase1e-98359
CP002797:1591000:160597616059761606734759Escherichia coli NA114, complete genomeTrans-aconitate 2-methyltransferase2e-98358
NC_008253:1534840:155279515527951553553759Escherichia coli 536, complete genometrans-aconitate 2-methyltransferase2e-97355
NC_009708:1735903:174011417401141740890777Yersinia pseudotuberculosis IP 31758 chromosome, complete genometrans-aconitate 2-methyltransferase5e-65247
NC_008149:2366500:238074623807462381522777Yersinia pestis Nepal516, complete genomepuative trans-aconitate methyltransferase1e-64246
NC_003143:2804500:281896228189622819738777Yersinia pestis CO92, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_006155:2979500:301220030122003012976777Yersinia pseudotuberculosis IP 32953, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_010634:2894631:293014229301422930918777Yersinia pseudotuberculosis PB1/+, complete genomemethyltransferase type 111e-64246
NC_004088:1851500:185243218524321853208777Yersinia pestis KIM, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_005810:2549680:258501625850162585792777Yersinia pestis biovar Microtus str. 91001, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_010159:1818500:183300018330001833776777Yersinia pestis Angola, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_009381:2138625:217117021711702171946777Yersinia pestis Pestoides F chromosome, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_014029:2756500:277128527712852772061777Yersinia pestis Z176003 chromosome, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_017154:2804000:281843528184352819211777Yersinia pestis D106004 chromosome, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_017160:2787637:278984427898442790620777Yersinia pestis D182038 chromosome, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_017168:2941938:294269829426982943474777Yersinia pestis A1122 chromosome, complete genometrans-aconitate 2-methyltransferase1e-64246
NC_014910:2015627:203112920311292031920792Alicycliphilus denitrificans BC chromosome, complete genometrans-aconitate 2-methyltransferase9e-65246
NC_015563:4773415:477860047786004779406807Delftia sp. Cs1-4 chromosome, complete genometrans-aconitate 2-methyltransferase8e-61233
NC_008702:2892605:291301429130142913775762Azoarcus sp. BH72, complete genomeprobable trans-aconitate 2-methyltransferase5e-53207
NC_013093:1411882:143210914321091432858750Actinosynnema mirum DSM 43827, complete genomeTrans-aconitate 2-methyltransferase5e-40164
NC_013159:1422370:142494614249461425713768Saccharomonospora viridis DSM 43017, complete genometrans-aconitate methyltransferase4e-39161
NC_017955:693303:693303693303694103801Modestobacter marinus, complete genometrans-aconitate methyltransferase2e-37155
NC_016111:2257166:227162322716232272432810Streptomyces cattleya NRRL 8057, complete genomeTrans-aconitate 2-methyltransferase1e-33143
NC_009656:2663387:268195426819542682781828Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-29128
NC_013037:1587673:158906315890631589827765Dyadobacter fermentans DSM 18053, complete genomeTrans-aconitate 2-methyltransferase2e-28126
NC_014638:363577:385310385310386029720Bifidobacterium bifidum PRL2010 chromosome, complete genometrans-aconitate 2-methyltransferase4e-22105
NC_015681:102000:108341108341109132792Thermodesulfatator indicus DSM 15286 chromosome, complete genometrans-aconitate 2-methyltransferase1e-1686.7
NC_014633:837588:863073863073863852780Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencebiotin biosynthesis protein BioC9e-0960.8
NC_013730:3137391:315058331505833151362780Spirosoma linguale DSM 74, complete genomeMethyltransferase type 117e-0857.8
NC_000911:352263:363433363433364218786Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0757
NC_017039:352263:363433363433364218786Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-0757
NC_017052:352251:363421363421364206786Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-0757
NC_017277:352263:363433363433364218786Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0757
NC_015656:2565417:256756225675622568314753Frankia symbiont of Datisca glomerata chromosome, complete genometype 11 methyltransferase3e-0755.8
NC_008278:7409711:742592574259257426512588Frankia alni ACN14a, complete genomeputative methyltransferase2e-0653.1
NC_013510:1295439:1308611130861113096241014Thermomonospora curvata DSM 43183, complete genomeMethyltransferase type 113e-0652.4
NC_012967:786534:804148804148804903756Escherichia coli B str. REL606 chromosome, complete genomebiotin biosynthesis protein BioC5e-0651.6
NC_013595:8553904:856936285693628570117756Streptosporangium roseum DSM 43021, complete genomehypothetical protein6e-0651.6