Pre_GI: BLASTP Hits

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Query: NC_013716:1298932:1313678 Citrobacter rodentium ICC168, complete genome

Start: 1313678, End: 1315039, Length: 1362

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:1305712:1319354131935413207151362Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspK0902
AP010958:1305712:1319354131935413207151362Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspK-homolog0902
NC_013361:3597812:3606081360608136074421362Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspK0897
NC_013008:1513000:1529364152936415307251362Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector0858
NC_011353:1513000:1529076152907615304371362Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein0858
NC_002695:1571389:1588148158814815895091362Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein0858
NC_002655:1655944:1672124167212416734851362Escherichia coli O157:H7 EDL933, complete genomehypothetical protein0858
NC_013364:1477248:1491836149183614931971362Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspK0855
AP010958:3669500:3675550367555036769141365Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspK-homolog0658
NC_013353:3669500:3675550367555036769141365Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspK0658
NC_017046:2717810:2726084272608427275531470Salmonella enterica subsp. enterica serovar Typhimurium str. 798leucine rich hypothetical protein2e-61237
NC_016860:2716152:2724426272442627258951470Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-61237
NC_016810:2719779:2726717272671727281861470Salmonella enterica subsp. enterica serovar Typhimurium strleucine rich hypothetical protein2e-61237
NC_011080:2722492:2729050272905027305191470Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein2e-61237
NC_003197:2720726:2728976272897627304691494Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein2e-61236
NC_016856:2773995:2780529278052927820221494Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-61236
NC_016857:2719779:2726693272669327281861494Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-61236
NC_016863:2721826:2728740272874027302331494Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-61236
NC_010067:892729:910776910776911675900Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-58226
NC_010634:3129174:3145850314585031470821233Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-46187
NC_005810:2905362:2922033292203329232651233Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-46187
NC_010159:2878499:2893789289378928950211233Yersinia pestis Angola, complete genomehypothetical protein2e-46187
NC_009381:2373847:2389135238913523903671233Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-46187
NC_008150:2451872:2468535246853524697671233Yersinia pestis Antiqua, complete genomehypothetical protein2e-45183
NC_004088:1622941:1629908162990816311401233Yersinia pestis KIM, complete genomehypothetical protein2e-45183
NC_003143:3346834:3363505336350533647371233Yersinia pestis CO92, complete genomehypothetical protein2e-45183
NC_008149:1556581:1559831155983115610631233Yersinia pestis Nepal516, complete genomehypothetical protein2e-45183
NC_014029:3401238:3417909341790934191411233Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-45183
NC_017154:3344273:3360944336094433621761233Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-45183
NC_017160:3326199:3342870334287033441021233Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-45183
NC_017168:2394079:2397329239732923985611233Yersinia pestis A1122 chromosome, complete genometype III secretion protein GogB2e-45183
NC_017265:1346685:1349070134907013503021233Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-45183
NC_010465:1550617:1557603155760315588351233Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein1e-44181
NC_014722:1084616:109763310976331098529897Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein7e-29128
NC_011353:1513000:152680815268081526927120Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein3e-1687