Pre_GI: BLASTP Hits

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Query: NC_013716:1298932:1306960 Citrobacter rodentium ICC168, complete genome

Start: 1306960, End: 1309308, Length: 2349

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:1477248:1484185148418514865332349Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspX01474
NC_013361:3597812:3611813361181336141612349Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspX01474
NC_013353:1305712:1312636131263613149842349Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspX01474
NC_011353:1513000:1520091152009115224392349Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein01474
AP010958:1305712:1312636131263613149842349Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspX-homolog01474
NC_002695:1571389:1579163157916315815112349Escherichia coli O157:H7 str. Sakai, complete genomeputative secreted effector protein01474
NC_013008:1513000:1520778152077815227271950Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector01246
NC_002655:1655944:1663537166353716654861950Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933N01243
NC_011094:2115750:2121305212130521236532349Salmonella enterica subsp. enterica serovar Schwarzengrund strsecreted effector protein4e-71270
NC_015761:1017301:1031568103156810339162349Salmonella bongori NCTC 12419, complete genometype III secretion system effector protein9e-67255
NC_005810:2905362:2922033292203329232651233Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-0757.8
NC_010159:2878499:2893789289378928950211233Yersinia pestis Angola, complete genomehypothetical protein4e-0757.8
NC_009381:2373847:2389135238913523903671233Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-0757.8
NC_008150:2451872:2468535246853524697671233Yersinia pestis Antiqua, complete genomehypothetical protein3e-0757.8
NC_004088:1622941:1629908162990816311401233Yersinia pestis KIM, complete genomehypothetical protein3e-0757.8
NC_003143:3346834:3363505336350533647371233Yersinia pestis CO92, complete genomehypothetical protein3e-0757.8
NC_008149:1556581:1559831155983115610631233Yersinia pestis Nepal516, complete genomehypothetical protein3e-0757.8
NC_014029:3401238:3417909341790934191411233Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-0757.8
NC_017154:3344273:3360944336094433621761233Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-0757.8
NC_017160:3326199:3342870334287033441021233Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-0757.8
NC_017168:2394079:2397329239732923985611233Yersinia pestis A1122 chromosome, complete genometype III secretion protein GogB3e-0757.8
NC_017265:1346685:1349070134907013503021233Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-0757.8
NC_010634:3129174:3145850314585031470821233Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-0757.8
NC_010465:1550617:1557603155760315588351233Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein4e-0757.4