Pre_GI: BLASTP Hits

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Query: NC_013716:1298932:1300723 Citrobacter rodentium ICC168, complete genome

Start: 1300723, End: 1301790, Length: 1068

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021066:3028421:3027357302735730284241068Raoultella ornithinolytica B6, complete genomeNMT1/THI5 like domain-containing protein2e-177621
NC_015136:1301576:1324358132435813254251068Burkholderia sp. CCGE1001 chromosome 1, complete sequencenitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein2e-54213
NC_014640:4193193:4209706420970642108151110Achromobacter xylosoxidans A8 chromosome, complete genomeABC sulfate ester transporter periplasmic ligand binding protein1e-49197
NC_013421:4714478:4752432475243247534391008Pectobacterium wasabiae WPP163, complete genomeNMT1/THI5 like domain protein9e-47187
NC_014733:107394:1293661293661304691104Methylovorus sp. MP688 chromosome, complete genomesulfonate ABC transporter, periplasmic sulfonate-binding protein ssua1e-27124
NC_008027:3677500:3685745368574536868121068Pseudomonas entomophila L48, complete genomeABC transporter, periplasmic sulfonate-binding protein3e-26119
NC_021182:4186515:4198028419802841990291002Clostridium pasteurianum BC1, complete genomeABC transporter, substrate-binding protein, aliphatic sulfonates family1e-1274.7
NC_009439:4734237:474664147466414747633993Pseudomonas mendocina ymp, complete genomealiphatic sulfonate ABC transporter periplasmic ligand-binding protein1e-1274.7
NC_007907:2830574:2837069283706928380701002Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1065.9
NC_016816:1970189:1970189197018919720751887Pantoea ananatis LMG 5342, complete genomeFis family sigma-54 specific transcriptional regulator2e-0963.5
NC_016023:1839503:183950318395031840489987Bacillus coagulans 36D1 chromosome, complete genomealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein4e-0962.4
NC_016830:6499234:650119765011976502162966Pseudomonas fluorescens F113 chromosome, complete genomeSsuA protein7e-0962
NC_015565:1163148:1171741117174111727751035Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein2e-0860.8
NC_013406:1217385:126284012628401263826987Paenibacillus sp. Y412MC10 chromosome, complete genomealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein2e-0860.5
NC_016816:1970189:197217019721701973117948Pantoea ananatis LMG 5342, complete genomealiphatic sulfonate ABC transporter substrate-binding protein3e-0860.1
NC_014121:2745097:274413827441382745100963Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completealkanesulfonate transporter substrate-binding subunit3e-0859.7
NC_013894:672840:680907680907681881975Thermocrinis albus DSM 14484 chromosome, complete genomealiphatic sulfonates family ABC transporter, periplasmic ligand-binding protein4e-0859.3
NC_018607:290500:3133753133753143821008Brachyspira pilosicoli B2904 chromosome, complete genomealiphatic sulfonates ABC transporter substrate-binding protein8e-0858.5
NC_012225:345704:358022358022358945924Brachyspira hyodysenteriae WA1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system2e-0757.4
NC_018750:7653000:7675312767531276766731362Streptomyces venezuelae ATCC 10712, complete genomeATP transporter periplasmic binding protein4e-0756.2
NC_009439:4734237:473761347376134738593981Pseudomonas mendocina ymp, complete genomealiphatic sulfonate ABC transporter periplasmic ligand-binding protein5e-0755.8
NC_007509:1383013:487648765847972Burkholderia sp. 383 chromosome 3, complete sequenceABC transporter, substrate-binding protein, aliphatic sulphonates5e-0755.5
NC_007509:3668:487648765847972Burkholderia sp. 383 chromosome 3, complete sequenceABC transporter, substrate-binding protein, aliphatic sulphonates5e-0755.5
NC_010505:1205747:120989612098961210894999Methylobacterium radiotolerans JCM 2831, complete genomealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein6e-0755.5
NC_015565:1163148:1165148116514811661881041Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein7e-0755.1
NC_010512:734834:750846750846751817972Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein8e-0755.1
NC_012225:345704:3568363568363578491014Brachyspira hyodysenteriae WA1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system8e-0755.1
NC_008544:348500:364819364819365790972Burkholderia cenocepacia HI2424 chromosome 3, complete sequencealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein1e-0654.7
NC_008062:370902:386999386999387970972Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceABC transporter, substrate-binding protein, aliphatic sulphonates1e-0654.7
NC_015275:521436:5325635325635336241062Clostridium lentocellum DSM 5427 chromosome, complete genomealiphatic sulfonates family ABC transporter, periplasmic ligand-binding protein2e-0653.9
NC_012925:191501:2069002069002079311032Streptococcus suis P1/7, complete genomeextracellular solute binding protein2e-0653.5
NC_010725:5217260:523224952322495233190942Methylobacterium populi BJ001, complete genomealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein2e-0653.5
NC_008392:542000:543030543030544001972Burkholderia cepacia AMMD chromosome 3, complete sequencealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein3e-0653.1
NC_021066:2197490:219653121965312197493963Raoultella ornithinolytica B6, complete genomealiphatic sulfonate ABC transporter substrate-binding protein5e-0652.4
NC_010581:561579:581203581203582177975Beijerinckia indica subsp. indica ATCC 9039, complete genomealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein6e-0652
NC_009485:3461051:346335634633563464297942Bradyrhizobium sp. BTAi1 chromosome, complete genomealkanesulfonate ABC transporter substrate binding protein7e-0652
NC_002678:7004370:7030549703054970315771029Mesorhizobium loti MAFF303099, complete genomehypothetical protein7e-0652
NC_009659:1129066:114738211473821148344963Janthinobacterium sp. Marseille chromosome, complete genomesulfonate ABC transporter periplasmic sulfonate-binding protein SsuA9e-0651.6