Pre_GI: BLASTP Hits

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Query: NC_013716:1138441:1138441 Citrobacter rodentium ICC168, complete genome

Start: 1138441, End: 1139103, Length: 663

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:1147556:114755611475561148218663Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-104379
NC_012125:2687980:270552727055272706189663Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-104377
NC_011094:1127983:112798311279831128645663Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-104377
NC_010102:2020762:203829820382982038960663Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-104375
NC_003198:1078113:107811310781131078775663Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein9e-104375
NC_004631:1881214:190203819020381902700663Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein9e-104375
NC_016831:1950650:196819619681961968858663Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-104375
NC_016832:1880174:189888818988881899550663Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-104375
NC_011083:1173802:117380211738021174464663Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-103374
NC_011149:1035990:103863310386331039295663Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein4e-103373
NC_011147:1802535:182376718237671824429663Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-102371
NC_006511:1808815:182858418285841829246663Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-102371
NC_010067:1829041:185464418546441855306663Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-99361
NC_014618:2989000:300581930058193006412594Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein3e-53207
NC_003143:1630000:163558016355801636260681Yersinia pestis CO92, complete genomehypothetical protein2e-34145
NC_008149:2802392:284743028474302848110681Yersinia pestis Nepal516, complete genomehypothetical protein2e-34145
NC_008150:844727:847485847485848165681Yersinia pestis Antiqua, complete genomehypothetical protein2e-34145
NC_010634:1755548:175554817555481756228681Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-34145
NC_014029:1702338:170509617050961705776681Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-34145
NC_017154:1644404:164716216471621647842681Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-34145
NC_013421:3093995:311157831115783112102525Pectobacterium wasabiae WPP163, complete genomeProtein of unknown function DUF20577e-25114
NC_010519:275976:278689278689279342654Haemophilus somnus 2336 chromosome, complete genomehypothetical protein8e-1994
NC_009092:2902171:292592229259222926611690Shewanella loihica PV-4, complete genomehypothetical protein2e-0652.8
NC_011663:3181579:320405132040513204740690Shewanella baltica OS223 chromosome, complete genomehypothetical protein6e-0651.2