Pre_GI: BLASTN Hits

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Query: NC_013714:796442 Bifidobacterium dentium Bd1, complete genome

Start: 796442, End: 820279, Length: 23838

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012814:1465738*1465738148788922152Bifidobacterium animalis subsp. lactis Bl-04, complete genome7e-41176BLASTN svgBLASTP svg
NC_012815:1465670*1465670148782122152Bifidobacterium animalis subsp. lactis DSM 10140, complete genome7e-41176BLASTN svgBLASTP svg
NC_009077:87416487416490865534492Mycobacterium sp. JLS, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014215:42168342168345090929227Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,6e-60240BLASTN svgBLASTP svg
NC_014215:14250014250016776025261Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,5e-1177.8BLASTN svgBLASTP svg
NC_013530:3365742*3365742338937923638Xylanimonas cellulosilytica DSM 15894, complete genome3e-0661.9BLASTN svgBLASTP svg