Pre_GI: BLASTN Hits

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Query: NC_013714:1521404 Bifidobacterium dentium Bd1, complete genome

Start: 1521404, End: 1546427, Length: 25024

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008618:1206157*1206157123086924713Bifidobacterium adolescentis ATCC 15703, complete genome03501BLASTN svgBLASTP svg
NC_015067:998500998500102062722128Bifidobacterium longum subsp. longum JCM 1217, complete genome5e-82313BLASTN svgBLASTP svg
NC_018750:33153093315309333886923561Streptomyces venezuelae ATCC 10712, complete genome6e-26127BLASTN svgBLASTP svg
NC_007712:16014991601499163292631428Sodalis glossinidius str. 'morsitans', complete genome8e-1693.7BLASTN svgBLASTP svg
NC_013093:2633000*2633000269098057981Actinosynnema mirum DSM 43827, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009801:995396995396101946824073Escherichia coli E24377A, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004307:57972957972960914329415Bifidobacterium longum NCC2705, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012815:23000230005344230443Bifidobacterium animalis subsp. lactis DSM 10140, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012814:23000230005344230443Bifidobacterium animalis subsp. lactis Bl-04, complete genome3e-0661.9BLASTN svgBLASTP svg