Query: NC_013714:1463143 Bifidobacterium dentium Bd1, complete genome
Start: 1463143, End: 1486752, Length: 23610
Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008618:1487000 | 1487000 | 1506800 | 19801 | Bifidobacterium adolescentis ATCC 15703, complete genome | 0 | 1053 | BLASTN svg | BLASTP svg |
NC_013521:1713416 | 1713416 | 1733599 | 20184 | Sanguibacter keddieii DSM 10542, complete genome | 5e-85 | 323 | BLASTN svg | BLASTP svg |
NC_020302:2116468 | 2116468 | 2138855 | 22388 | Corynebacterium halotolerans YIM 70093 = DSM 44683, complete | 2e-78 | 301 | BLASTN svg | BLASTP svg |
NC_008699:2418722 | 2418722 | 2447396 | 28675 | Nocardioides sp. JS614, complete genome | 5e-48 | 200 | BLASTN svg | BLASTP svg |
NC_007164:822000 | 822000 | 845975 | 23976 | Corynebacterium jeikeium K411, complete genome | 5e-45 | 190 | BLASTN svg | BLASTP svg |
NC_010545:1475410 | 1475410 | 1514272 | 38863 | Corynebacterium urealyticum DSM 7109, complete genome | 4e-39 | 170 | BLASTN svg | BLASTP svg |
NC_008711:1892881 | 1892881 | 1911949 | 19069 | Arthrobacter aurescens TC1, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_014158:1566310 | 1566310 | 1588072 | 21763 | Tsukamurella paurometabola DSM 20162 chromosome, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_008595:2252830 | 2252830 | 2273720 | 20891 | Mycobacterium avium 104, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_013721:430000* | 430000 | 452141 | 22142 | Gardnerella vaginalis 409-05, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_014550:2314359 | 2314359 | 2334079 | 19721 | Arthrobacter arilaitensis Re117, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_014836:33278 | 33278 | 58765 | 25488 | Desulfurispirillum indicum S5 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_011146:3537546* | 3537546 | 3568042 | 30497 | Geobacter bemidjiensis Bem, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_011080:4177443* | 4177443 | 4200405 | 22963 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |