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Query: NC_013714:1463143 Bifidobacterium dentium Bd1, complete genome

Start: 1463143, End: 1486752, Length: 23610

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008618:14870001487000150680019801Bifidobacterium adolescentis ATCC 15703, complete genome01053BLASTN svgBLASTP svg
NC_013521:17134161713416173359920184Sanguibacter keddieii DSM 10542, complete genome5e-85323BLASTN svgBLASTP svg
NC_020302:21164682116468213885522388Corynebacterium halotolerans YIM 70093 = DSM 44683, complete2e-78301BLASTN svgBLASTP svg
NC_008699:24187222418722244739628675Nocardioides sp. JS614, complete genome5e-48200BLASTN svgBLASTP svg
NC_007164:82200082200084597523976Corynebacterium jeikeium K411, complete genome5e-45190BLASTN svgBLASTP svg
NC_010545:14754101475410151427238863Corynebacterium urealyticum DSM 7109, complete genome4e-39170BLASTN svgBLASTP svg
NC_008711:18928811892881191194919069Arthrobacter aurescens TC1, complete genome1e-23119BLASTN svgBLASTP svg
NC_014158:15663101566310158807221763Tsukamurella paurometabola DSM 20162 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_008595:22528302252830227372020891Mycobacterium avium 104, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013721:430000*43000045214122142Gardnerella vaginalis 409-05, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014550:23143592314359233407919721Arthrobacter arilaitensis Re117, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014836:33278332785876525488Desulfurispirillum indicum S5 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011146:3537546*3537546356804230497Geobacter bemidjiensis Bem, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011080:4177443*4177443420040522963Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-0867.9BLASTN svgBLASTP svg