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Query: NC_013714:1376500 Bifidobacterium dentium Bd1, complete genome

Start: 1376500, End: 1416140, Length: 39641

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008618:10950001095000111462019621Bifidobacterium adolescentis ATCC 15703, complete genome4e-34155BLASTN svgBLASTP svg
NC_015576:808926*80892683565426729Mycobacterium sp. JDM601 chromosome, complete genome6e-21111BLASTN svgBLASTP svg
NC_014814:85912485912490088141758Mycobacterium sp. Spyr1 chromosome, complete genome6e-21111BLASTN svgBLASTP svg
NC_014117:132524*13252417885446331Burkholderia sp. CCGE1002 chromosome chromosome 1, complete3e-19105BLASTN svgBLASTP svg
NC_006361:4597718*4597718462893531218Nocardia farcinica IFM 10152, complete genome5e-18101BLASTN svgBLASTP svg
NC_007777:12960001296000131759921600Frankia sp. CcI3, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_014221:1277022*1277022129617619155Truepera radiovictrix DSM 17093 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013947:16659941665994169310927116Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009077:87416487416490865534492Mycobacterium sp. JLS, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013235:17615391761539178059919061Nakamurella multipartita DSM 44233, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_015740:2407500*2407500244682739328Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-1075.8BLASTN svgBLASTP svg
NC_009720:75061275061278422333612Xanthobacter autotrophicus Py2, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012815:1757992*1757992178040722416Bifidobacterium animalis subsp. lactis DSM 10140, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012814:1757753*1757753178063522883Bifidobacterium animalis subsp. lactis Bl-04, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014218:1663486*1663486168642122936Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_009049:1934398*1934398196979735400Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_009664:1195630*1195630122637430745Kineococcus radiotolerans SRS30216, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_004369:1051013*1051013107385922847Corynebacterium efficiens YS-314, complete genome5e-0661.9BLASTN svgBLASTP svg