Pre_GI: BLASTN Hits

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Query: NC_013714:1048783 Bifidobacterium dentium Bd1, complete genome

Start: 1048783, End: 1067099, Length: 18317

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013714:1028569*1028569104859920031Bifidobacterium dentium Bd1, complete genome3e-39170BLASTN svgBLASTP svg
NC_018720:18120001812000183689224893Bifidobacterium asteroides PRL2011 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_013714:2350749*2350749237219321445Bifidobacterium dentium Bd1, complete genome1e-20109BLASTN svgBLASTP svg