Pre_GI: BLASTP Hits

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Query: NC_013714:2350749:2362655 Bifidobacterium dentium Bd1, complete genome

Start: 2362655, End: 2364730, Length: 2076

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013165:1584977:1608043160804316135865544Slackia heliotrinireducens DSM 20476, complete genomepredicted helicase1e-127457
NC_017955:1667500:1678714167871416834834770Modestobacter marinus, complete genomeHelicase6e-121435
NC_009328:2905000:2918927291892729236874761Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein3e-117423
NC_008538:46469:5781957819626604842Arthrobacter sp. FB24 plasmid 2, complete sequencetype III restriction enzyme, res subunit5e-116419
NC_016943:1442885:1462107146210714668704764Blastococcus saxobsidens DD2, complete genomeputative Helicase2e-115417
NC_014215:349917:3633313633313681124782Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,helicase2e-112406
NC_017986:1862408:1867994186799418728954902Pseudomonas putida ND6 chromosome, complete genomehelicase domain-containing protein6e-112405
NC_015152:2026049:2036181203618120410794899Spirochaeta sp. Buddy chromosome, complete genometype III restriction protein res subunit1e-109397
NC_004578:20738:4744847448523584911Pseudomonas syringae pv. tomato str. DC3000, complete genomehelicase domain protein1e-109397
NC_015578:2191000:2208590220859022135905001Treponema primitia ZAS-2 chromosome, complete genomeendonuclease and methylase LlaGI8e-109395
NC_015578:1038588:1050775105077510557544980Treponema primitia ZAS-2 chromosome, complete genomeendonuclease and methylase LlaGI7e-108392
NC_017098:1542284:1558173155817315630234851Spirochaeta africana DSM 8902 chromosome, complete genomeputative helicase4e-107389
NC_008095:2117952:2132683213268321376534971Myxococcus xanthus DK 1622, complete genomeputative restriction/modification enzyme6e-105382
NC_014844:442380:4507084507084555494842Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometype III restriction protein res subunit6e-104379
NC_007651:3560652:3585806358580635889973192Burkholderia thailandensis E264 chromosome I, complete sequencehelicase domain protein3e-103376
NC_003450:3266604:3276669327666932816004932Corynebacterium glutamicum ATCC 13032, complete genomeputative helicase5e-103375
NC_006958:3240019:3249976324997632549164941Corynebacterium glutamicum ATCC 13032, complete genomeDNA or RNA helicase of superfamily II5e-103375
NC_012846:929570:9295709295709344804911Bartonella grahamii as4aup, complete genomehelicase/methyltransferase1e-102374
NC_012846:1778443:1797703179770318026804978Bartonella grahamii as4aup, complete genome1e-102374
NC_012846:1952178:1969434196943419744104977Bartonella grahamii as4aup, complete genome1e-102374
NC_002937:2263763:2270961227096122757484788Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeadenine specific DNA methyltransferase, putative1e-102374
NC_021064:793098:7984197984198010342616Propionibacterium avidum 44067, complete genomehelicase1e-102374
NC_008752:620802:6280546280546328834830Acidovorax avenae subsp. citrulli AAC00-1, complete genometype III restriction enzyme, res subunit3e-102373
NC_009615:1734752:1779432177943217844264995Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase3e-102373
NC_008826:84218:8994089940947874848Methylibium petroleiphilum PM1 plasmid RPME01, complete sequenceadenine specific DNA methyltransferase, putative3e-102373
NC_014168:1724993:1735931173593117408414911Segniliparus rotundus DSM 44985 chromosome, complete genometype III restriction protein res subunit6e-102372
NC_014153:3084356:3085256308525630902865031Thiomonas intermedia K12 chromosome, complete genometype III restriction protein res subunit5e-102372
NC_011958:976500:99589499589410007564863Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein4e-102372
NC_012724:2682154:2696731269673127014944764Burkholderia glumae BGR1 chromosome 1, complete genomeAdenine specific DNA methyltransferase, putative1e-95351
NC_017111:2032500:2034834203483420389224089Acetobacter pasteurianus IFO 3283-32, complete genomeDNA helicase restriction enzyme Type III R subunit1e-89331
NC_017108:2032500:2034846203484620389044059Acetobacter pasteurianus IFO 3283-12, complete genomeDNA helicase restriction enzyme Type III R subunit1e-89331
NC_017125:2035000:2037514203751420423914878Acetobacter pasteurianus IFO 3283-22, complete genomeDNA helicase restriction enzyme Type III R subunit2e-89330
NC_017100:2035000:2037519203751920424114893Acetobacter pasteurianus IFO 3283-03, complete genomeDNA helicase restriction enzyme Type III R subunit2e-89330
NC_013209:2032500:2034864203486420397714908Acetobacter pasteurianus IFO 3283-01, complete genomeDNA helicase restriction enzyme Type III R subunit1e-89330
NC_017121:2032500:2034846203484620397534908Acetobacter pasteurianus IFO 3283-07, complete genomeDNA helicase restriction enzyme Type III R subunit1e-89330
NC_017146:2035000:2037526203752620424334908Acetobacter pasteurianus IFO 3283-26, complete genomeDNA helicase restriction enzyme Type III R subunit1e-89330
NC_017150:1940000:1942610194261019475174908Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA helicase restriction enzyme Type III R subunit1e-89330
NC_008229:1149480:1155450115545011586923243Helicobacter acinonychis str. Sheeba, complete genomehelicase9e-89328
NC_014820:1057826:1065686106568610692133528Cenarchaeum symbiosum A, complete genomehelicase7e-87322
NC_008341:29038:3215032150366914542Nitrosomonas eutropha C91 plasmid1, complete sequencetype III restriction enzyme, res subunit2e-84313
NC_017167:1648913:1719871171987117242504380Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1adenine specific DNA methyltransferase1e-66254
NC_002620:705075:7193787193787223923015Chlamydia muridarum Nigg, complete genomehelicase, putative2e-50201
NC_015380:859424:8632188632188663583141Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomehypothetical protein4e-48193
NC_017167:2298962:2330637233063723316741038Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein2e-38160
NC_010161:432000:455554455554456534981Bartonella tribocorum CIP 105476, complete genomehelicase domain-containing protein2e-36154
NC_016109:8761557:8766141876614187696953555Kitasatospora setae KM-6054, complete genomehypothetical protein8e-33142
NC_016109:1:1358413584171383555Kitasatospora setae KM-6054, complete genomehypothetical protein8e-33142
NC_015953:1:85978597110382442Streptomyces sp. SirexAA-E chromosome, complete genomehelicase domain-containing protein2e-31137
NC_016114:1:1086410864135092646Streptomyces flavogriseus ATCC 33331 chromosome, complete genometype III restriction protein res subunit3e-27124
NC_015953:1:1189311893142682376Streptomyces sp. SirexAA-E chromosome, complete genometype III restriction protein res subunit3e-27124
NC_012660:5793200:580022458002245800910687Pseudomonas fluorescens SBW25 chromosome, complete genome9e-27122
NC_016109:1:38238227452364Kitasatospora setae KM-6054, complete genomeputative helicase2e-26121
NC_016109:8761557:8780534878053487828972364Kitasatospora setae KM-6054, complete genomeputative helicase2e-26121
NC_015957:5182460:5208278520827852107552478Streptomyces violaceusniger Tu 4113 chromosome, complete genomehelicase-associated2e-24114
NC_003155:3994:4936493675632628Streptomyces avermitilis MA-4680, complete genomehelicase2e-1998.2
NC_013929:10133902:1014438010144380101470492670Streptomyces scabiei 87.22 chromosome, complete genomehelicase3e-1480.9
NC_009429:401500:4239974239974264442448Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein1e-1172
NC_015677:1282865:1288035128803512904852451Ramlibacter tataouinensis TTB310 chromosome, complete genometype I site-specific restriction-modification system, R subunit1e-1068.6
NC_014034:1418681:1421843142184314242962454Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIIIP subunit R2e-1067.8
NC_011144:1073944:1089242108924210916892448Phenylobacterium zucineum HLK1, complete genometype I restriction-modification system, R subunit1e-0965.5
NC_019897:3613830:3635423363542336387763354Thermobacillus composti KWC4 chromosome, complete genomehelicase, type I site-specific restriction-modification system restriction subunit2e-0964.7
NC_011992:1234610:1252504125250412549872484Acidovorax ebreus TPSY, complete genomeEcoEI R domain protein5e-0963.5
NC_008782:2781229:2787465278746527899182454Acidovorax sp. JS42, complete genomeEcoEI R, C-terminal domain protein6e-0963.2
NC_013406:1217385:1238848123884812422013354Paenibacillus sp. Y412MC10 chromosome, complete genometype III restriction protein res subunit1e-0862
NC_018748:3187233:3194890319489031971332244Emticicia oligotrophica DSM 17448 chromosome, complete genometype III restriction protein res subunit3e-0860.8
NC_014394:3114648:3128449312844931307972349Gallionella capsiferriformans ES-2 chromosome, complete genomeType I site-specific deoxyribonuclease5e-0860.5
NC_015500:2866027:2881678288167828840742397Treponema brennaborense DSM 12168 chromosome, complete genomeType I site-specific deoxyribonuclease6e-0860.1
NC_014820:1117961:112602111260211126515495Cenarchaeum symbiosum A, complete genomehelicase1e-0758.9
NC_015844:3159046:3161935316193531651503216Zobellia galactanivorans, complete genometype I restriction enzyme ZgaDI, R subunit1e-0758.9
NC_012673:2535427:2545081254508125464691389Exiguobacterium sp. AT1b, complete genometype III restriction protein res subunit6e-0756.6
NC_011138:3881446:3895467389546738988923426Alteromonas macleodii 'Deep ecotype', complete genomeType I site-specific restriction-modification system, R (restriction) subunit and related helicase1e-0655.5