Pre_GI: BLASTP Hits

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Query: NC_013714:2350749:2353603 Bifidobacterium dentium Bd1, complete genome

Start: 2353603, End: 2354760, Length: 1158

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016641:2894899:2919994291999429210791086Paenibacillus terrae HPL-003 chromosome, complete genomeMultiple sugar-binding periplasmic receptor chvE5e-69261
NC_014483:1146682:1158577115857711596621086Paenibacillus polymyxa E681 chromosome, complete genomeMultiple sugar-binding periplasmic receptor chvE precursor3e-68259
NC_016593:2015321:2022353202235320234321080Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeABC-type xylose transport system periplasmic component-like protein6e-67254
NC_006510:1921541:1949018194901819500971080Geobacillus kaustophilus HTA426, complete genomeABC transporter (substrate-binding protein)6e-67254
NC_014206:1694330:1704551170455117056301080Geobacillus sp. C56-T3 chromosome, complete genomeABC transporter substrate-binding protein4e-66252
NC_010407:151599:1577231577231588411119Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative extracellular sugar-binding protein5e-66251
NC_014829:1376253:1378907137890713800101104Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-65250
NC_013406:1640787:1652061165206116534881428Paenibacillus sp. Y412MC10 chromosome, complete genomeABC-type xylose transport system periplasmic component-like protein5e-65248
NC_009328:1903291:1908123190812319091991077Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter ATP-binding protein1e-64247
NC_019973:6102442:6130288613028861313581071Mesorhizobium australicum WSM2073, complete genomeABC-type xylose transport system, periplasmic component2e-59229
NC_020291:5093138:5117428511742851185581131Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeABC-type xylose transport system, periplasmic component4e-59229
NC_015559:3511231:3526358352635835274521095Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeputative sugar uptake ABC transporter periplasmic solute-binding protein precursor9e-55214
NC_006087:28490:3409234092351621071Leifsonia xyli subsp. xyli str. CTCB07, complete genomemultiple sugar-binding periplasmic receptor2e-45183
NC_015732:30472:3657136571376861116Spirochaeta caldaria DSM 7334 chromosome, complete genomeABC transporter1e-43177
NC_014720:154111:2001632001632012181056Caldicellulosiruptor kronotskyensis 2002 chromosome, completed-xylose ABC transporter, periplasmic substrate-binding protein8e-40164
NC_007644:2099878:2109667210966721108121146Moorella thermoacetica ATCC 39073, complete genomePeriplasmic binding protein/LacI transcriptional regulator2e-39163
NC_010320:143109:1535381535381546441107Thermoanaerobacter sp. X514 chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein3e-38159
NC_014538:187747:1934041934041945101107Thermoanaerobacter sp. X513 chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein3e-38159
NC_014837:33014:541895418955181993Pantoea sp. At-9b chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein3e-36152
NC_017323:1644000:1689453168945316904901038Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceD-xylose ABC transporter periplasmic substrate-binding protein1e-35150
NC_018000:4958637:4958637495863749596741038Sinorhizobium fredii USDA 257 chromosome, complete genomeD-xylose-binding periplasmic protein XylF5e-35149
NC_004337:3590323:371279437127943713786993Shigella flexneri 2a str. 301, complete genomexylose binding protein9e-35147
NC_014931:6203872:6246643624664362476651023Variovorax paradoxus EPS chromosome, complete genomeD-xylose ABC transporter, periplasmic substrate-binding protein3e-34146
NC_006510:1901954:1910407191040719114981092Geobacillus kaustophilus HTA426, complete genomeD-xylose ABC transporter (substrate-binding protein)6e-34145
NC_019897:905185:9079969079969090931098Thermobacillus composti KWC4 chromosome, complete genomexylose ABC transporter substrate-binding protein5e-34145
NC_008800:4488112:450847545084754509470996Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,D-xylose transporter subunit XylF1e-33144
NC_014364:773500:7789777789777800801104Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeD-xylose ABC transporter, periplasmic substrate-binding protein7e-33141
NC_014960:1910202:1924235192423519253621128Anaerolinea thermophila UNI-1, complete genomeD-xylose ABC transporter substrate binding protein precursor8e-33141
NC_015224:4426167:444330844433084444303996Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,D-xylose transporter subunit XylF1e-32140
NC_008150:4634695:464761846476184648613996Yersinia pestis Antiqua, complete genomesugar-binding periplasmic protein4e-32139
NC_010465:62348:641306413065125996Yersinia pseudotuberculosis YPIII, complete genomeD-xylose ABC transporter, periplasmic substrate-binding protein4e-32139
NC_017160:4508000:452561245256124526607996Yersinia pestis D182038 chromosome, complete genomesugar-binding periplasmic protein4e-32139
NC_019897:905185:9067379067379078701134Thermobacillus composti KWC4 chromosome, complete genomexylose ABC transporter substrate-binding protein6e-29128
NC_014720:154111:1948081948081958961089Caldicellulosiruptor kronotskyensis 2002 chromosome, completemonosaccharide-transporting atpase2e-26120
NC_015732:30472:3538635386364261041Spirochaeta caldaria DSM 7334 chromosome, complete genomeD-xylose ABC transporter substrate-binding protein3e-25116
NC_021177:6662668:6676348667634866774601113Streptomyces fulvissimus DSM 40593, complete genomeSolute-binding protein6e-24112
NC_010572:1748668:1753166175316617542781113Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter solute-binding protein2e-23110
NC_015953:5908467:5922472592247259235811110Streptomyces sp. SirexAA-E chromosome, complete genomeputative ABC transporter solute-binding protein8e-23108
NC_015519:1888917:1900190190019019012661077Tepidanaerobacter sp. Re1 chromosome, complete genomeperiplasmic sugar-binding protein8e-23108
NC_003888:6568000:6589575658957565906901116Streptomyces coelicolor A3(2), complete genomesolute-binding protein7e-23108
NC_014310:2017927:2033622203362220346411020Ralstonia solanacearum PSI07 megaplasmid, complete sequenceD-xylose-binding periplasmic protein5e-23108
NC_013739:5705325:5709242570924257103841143Conexibacter woesei DSM 14684, complete genomeputative sugar ABC transporter, substrate- binding protein1e-22107
NC_003888:4031299:4047138404713840482561119Streptomyces coelicolor A3(2), complete genomesecreted solute-binding protein1e-21104
NC_016114:1435436:1439779143977914408881110Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeABC transporter substrate-binding protein3e-21102
NC_003155:2730469:2734874273487427359831110Streptomyces avermitilis MA-4680, complete genomeABC transporter solute-binding protein7e-21101
NC_014014:153837:1744281744281756241197Mycoplasma crocodyli MP145 chromosome, complete genome46 kDa surface antigen (p46)2e-20100
NC_017093:5410932:5418784541878454199111128Actinoplanes missouriensis 431, complete genomeputative ABC transporter substrate-binding protein2e-20100
NC_013929:2375613:2381873238187323829641092Streptomyces scabiei 87.22 chromosome, complete genomesolute-binding protein9e-2098.2
NC_008010:321561:329446329446329961516Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceD-xylose-binding periplasmic protein precursor2e-1687
NC_013510:3117837:3122280312228031233561077Thermomonospora curvata DSM 43183, complete genomeD-xylose-binding periplasmic ABC transporter protein6e-1685.5
NC_020908:2788852:2794694279469427957311038Octadecabacter arcticus 238, complete genomeputative sugar ABC transporter extracellular solute-binding protein3e-1273.2
NC_018750:6315802:6332963633296363340271065Streptomyces venezuelae ATCC 10712, complete genomeL-arabinose-binding periplasmic protein precursor AraF2e-1170.9
NC_013517:4208939:424657742465774247536960Sebaldella termitidis ATCC 33386, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0758.2
NC_008010:321561:328159328159328701543Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceD-xylose-binding periplasmic protein precursor2e-0757.4
NC_017954:934616:9372219372219382581038Thermogladius cellulolyticus 1633 chromosome, complete genomesugar ABC transporter periplasmic protein6e-0755.5
NC_012785:638000:649402649402650280879Kosmotoga olearia TBF 19.5.1, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0654.7
NC_012559:1635922:163844016384401639369930Laribacter hongkongensis HLHK9, complete genomeRbsB3e-0653.1
NC_006347:3805500:3809824380982438125472724Bacteroides fragilis YCH46, complete genometwo-component system sensor histidine kinase/response regulator hybrid6e-0652.4
NC_015224:1703130:172523517252351726227993Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,galactose-binding protein8e-0651.6