Pre_GI: BLASTP Hits

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Query: NC_013714:2203854:2213627 Bifidobacterium dentium Bd1, complete genome

Start: 2213627, End: 2214283, Length: 657

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008618:1804610:181705918170591817715657Bifidobacterium adolescentis ATCC 15703, complete genometwo-component response regulator4e-1684.7
NC_010086:20876:442254422544869645Burkholderia multivorans ATCC 17616 chromosome 2, completetwo component transcriptional regulator, LuxR family9e-1270.5
NC_013721:533048:549417549417550070654Gardnerella vaginalis 409-05, complete genometranscriptional regulator, LuxR family5e-1167.8
NC_018750:6132619:615907761590776159742666Streptomyces venezuelae ATCC 10712, complete genomeDNA-binding response regulator, LuxR family8e-1063.9
NC_010627:532407:532407532407533048642Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetwo component transcriptional regulator, LuxR family1e-0963.5
NC_015566:3269469:328545032854503286070621Serratia sp. AS12 chromosome, complete genometwo component LuxR family transcriptional regulator4e-0961.6
NC_013037:2043921:206658620665862067209624Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LuxR family1e-0859.7
NC_011146:2614500:262223026222302622880651Geobacter bemidjiensis Bem, complete genometwo component transcriptional regulator, LuxR family5e-0858.2
NC_015161:162000:165219165219165887669Deinococcus proteolyticus MRP chromosome, complete genometwo component transcriptional regulator, LuxR family5e-0857.8
NC_009328:2161116:219094321909432191614672Geobacillus thermodenitrificans NG80-2 chromosome, complete genometwo-component response regulator ComA1e-0757
NC_012491:6143928:6163238616323861650281791Brevibacillus brevis NBRC 100599, complete genometwo-component hybrid sensor and regulator1e-0757
NC_011593:2014787:202341620234162024117702Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,two component transcriptional regulator, LuxR family1e-0757
NC_013205:526281:573068573068573763696Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,two component transcriptional regulator, LuxR family9e-0857
NC_012918:2277500:228645922864592287109651Geobacter sp. M21 chromosome, complete genomeLuxR family transcriptional regulator1e-0756.6
NC_012526:2483000:250248225024822503132651Deinococcus deserti VCD115, complete genomeputative response regulator, NarL2e-0755.8
NC_013446:1648556:166244216624421663029588Comamonas testosteroni CNB-2, complete genometwo component transcriptional regulator, LuxR2e-0755.8
NC_016631:4423658:443437744343774435015639Granulicella mallensis MP5ACTX8 chromosome, complete genometwo component transcriptional regulator, LuxR family2e-0755.8
NC_012483:1567253:157616715761671576817651Acidobacterium capsulatum ATCC 51196, complete genometwo-component system regulatory protein3e-0755.5
NC_008148:2498000:252802925280292528718690Rubrobacter xylanophilus DSM 9941, complete genometwo component transcriptional regulator, LuxR family3e-0755.5
NC_021184:148000:151270151270151911642Desulfotomaculum gibsoniae DSM 7213, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain3e-0755.1
NC_014215:1929000:193663719366371937302666Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Two-component system response regulator4e-0755.1
NC_015660:3518931:353698635369863537657672Geobacillus thermoglucosidasius C56-YS93 chromosome, completetwo component LuxR family transcriptional regulator4e-0755.1
NC_011830:1288984:130235713023571302995639Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LuxR family5e-0754.7
NC_013501:1140390:115172711517271152362636Rhodothermus marinus DSM 4252, complete genometwo component transcriptional regulator, LuxR family5e-0754.7
NC_009328:448224:494722494722495354633Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA-binding response regulator4e-0754.7
NC_014365:2359760:238159223815922382257666Desulfarculus baarsii DSM 2075 chromosome, complete genometranscriptional regulator, LuxR family4e-0754.7
NC_014206:1497942:150841915084191509048630Geobacillus sp. C56-T3 chromosome, complete genomeLuxR family transcriptional regulator6e-0754.3
NC_013411:2951559:296736429673642967993630Geobacillus sp. Y412MC61, complete genometwo component transcriptional regulator, LuxR family6e-0754.3
NC_014915:2092678:210729521072952107924630Geobacillus sp. Y412MC52 chromosome, complete genometwo component transcriptional regulator, LuxR family6e-0754.3
NC_006510:2110430:212705221270522127681630Geobacillus kaustophilus HTA426, complete genometwo component response regulator6e-0754.3
NC_016609:7565483:756867775686777569318642Niastella koreensis GR20-10 chromosome, complete genometwo component transcriptional regulator, LuxR family8e-0753.9
NC_007907:5185510:524467952446795245317639Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-0753.9
NC_015589:3241364:325205832520583252759702Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeresponse regulator receiver1e-0653.5
NC_007492:2629350:262935026293502629988639Pseudomonas fluorescens PfO-1, complete genomeTwo Component Transcriptional Regulator, LuxR family1e-0653.1
NC_013595:3541012:354101235410123541677666Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein2e-0653.1
NC_016047:2658000:265939126593912660035645Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetwo component response regulator2e-0652.4
NC_014761:417377:420772420772421413642Oceanithermus profundus DSM 14977 chromosome, complete genometwo component transcriptional regulator, luxr family2e-0652.4
NC_014618:3482053:350087935008793501511633Enterobacter cloacae SCF1 chromosome, complete genomeLuxR family two component transcriptional regulator2e-0652.4
NC_006322:2658587:267722626772262677870645Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0652
NC_006270:2657726:267636626763662677010645Bacillus licheniformis ATCC 14580, complete genometwo-component response regulator3e-0652
NC_018524:4848154:487061648706164871275660Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, luxR family protein3e-0652
NC_015723:280368:303094303094303756663Cupriavidus necator N-1 chromosome 2, complete sequencenodulation protein NodW4e-0651.6
NC_018581:4992952:501621750162175016894678Gordonia sp. KTR9 chromosome, complete genomeResponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain5e-0651.2
NC_015497:2859724:287195728719572872604648Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometwo component transcriptional regulator, LuxR family5e-0651.2
NC_008702:2942246:294529629452962945943648Azoarcus sp. BH72, complete genometwo-component response regulator5e-0651.2
NC_015723:280368:292622292622293332711Cupriavidus necator N-1 chromosome 2, complete sequencenodulation protein NodW6e-0650.8
NC_010627:463646:466207466207466839633Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence7e-0650.8