Pre_GI: BLASTP Hits

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Query: NC_013714:1463143:1483820 Bifidobacterium dentium Bd1, complete genome

Start: 1483820, End: 1484359, Length: 540

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007777:4597379:460100146010014601606606Frankia sp. CcI3, complete genomeconserved hypothetical protein 7303e-1891.3
NC_008786:1936626:193897819389781939571594Verminephrobacter eiseniae EF01-2, complete genomeconserved hypothetical protein 7305e-2097.1
NC_008536:4921224:492459749245974925181585Solibacter usitatus Ellin6076, complete genomeconserved hypothetical protein 7308e-1889.7
NC_018748:2119679:214239621423962142977582Emticicia oligotrophica DSM 17448 chromosome, complete genomeConserved hypothetical protein CHP007303e-29127
NC_014622:5315500:533334453333445333898555Paenibacillus polymyxa SC2 chromosome, complete genomedecarboxylase4e-24110
NC_014500:4049384:406444540644454065122678Dickeya dadantii 3937 chromosome, complete genomeDecarboxylase family protein2e-29128
NC_002939:3043068:304565730456573046247591Geobacter sulfurreducens PCA, complete genomedecarboxylase family protein7e-28123
NC_016111:4613599:462679446267944627441648Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1788.6
NC_008596:5186042:518604251860425186626585Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein2e-1375.5
NC_013740:571879:577378577378577917540Acidaminococcus fermentans DSM 20731, complete genomehypothetical protein5e-43173
NC_007513:1159497:117555111755511176099549Synechococcus sp. CC9902, complete genomehypothetical protein3e-30131
NC_013173:1259898:126065212606521261200549Desulfomicrobium baculatum DSM 4028, complete genomehypothetical protein3e-28124
NC_015312:2278566:232386223238622324446585Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein1e-25115
NC_016626:1825845:184993118499311850536606Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein6e-23107
NC_011891:2088134:210783621078362108462627Anaeromyxobacter dehalogenans 2CP-1, complete genomehypothetical protein1e-1789
NC_013093:832971:856149856149856691543Actinosynnema mirum DSM 43827, complete genomehypothetical protein9e-1579.7
NC_013730:6707812:673417267341726734723552Spirosoma linguale DSM 74, complete genomehypothetical protein3e-26117
NC_015951:46000:651586515865799642Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completehypothetical protein9e-1889.7
NC_013421:1143500:115097811509781151574597Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-31134
NC_019897:329945:372481372481373065585Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-27121
NC_016641:1085862:110226611022661102820555Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein3e-24110
NC_009464:931647:958706958706959308603Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein2e-22104
NC_007681:930921:933039933039933575537Methanosphaera stadtmanae DSM 3091, complete genomehypothetical protein3e-1581.3
NC_009832:2969376:299121029912102991782573Serratia proteamaculans 568, complete genomehypothetical protein2e-29128
NC_014483:4957315:497511249751124975666555Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein3e-24111
NC_007517:3151742:316730031673003167881582Geobacter metallireducens GS-15, complete genomehypothetical protein1e-22106
NC_008596:4196194:421556942155694216120552Mycobacterium smegmatis str. MC2 155, complete genomepossible lysine decarboxylase superfamily protein6e-1580.5
NC_017192:1799000:181739918173991817956558Arcobacter sp. L, complete genomeputative lysine decarboxylase4e-31134
NC_020063:1051310:105878010587801059367588Enterobacteriaceae bacterium strain FGI 57, complete genomeTIGR00730 family protein9e-32136