Pre_GI: BLASTP Hits

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Query: NC_013714:1463143:1480311 Bifidobacterium dentium Bd1, complete genome

Start: 1480311, End: 1481057, Length: 747

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009925:647752:6582026582026616093408Acaryochloris marina MBIC11017, complete genometype I restriction enzyme R protein9e-1684
NC_014640:6815264:6820902682090268243573456Achromobacter xylosoxidans A8 chromosome, complete genometype III restriction enzyme, Res subunit6e-1271.2
NC_011138:3881446:3895467389546738988923426Alteromonas macleodii 'Deep ecotype', complete genomeType I site-specific restriction-modification system, R (restriction) subunit and related helicase5e-1375.1
NC_013203:202008:2336162336162369933378Atopobium parvulum DSM 20469, complete genometype III restriction protein res subunit4e-35148
NC_015737:449914:4573824573824607593378Clostridium sp. SY8519, complete genomehypothetical protein2e-24112
NC_006510:372826:3812573812573845953339Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system R subunit (endonuclease)3e-23108
NC_014206:411143:4187894187894221303342Geobacillus sp. C56-T3 chromosome, complete genometype I site-specific deoxyribonuclease6e-23107
NC_016593:416661:4237054237054270493345Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetype I restriction-modification system R subunit3e-23108
NC_016027:1902854:1928603192860319319983396Gluconacetobacter xylinus NBRC 3288, complete genometype III restriction enzyme, res subunit3e-0962.4
NC_007645:5160133:5178827517882751823843558Hahella chejuensis KCTC 2396, complete genomeType I site-specific restriction-modification system, R (restriction) subunit and related helicase1e-1583.2
NC_008358:2638245:2689150268915026925543405Hyphomonas neptunium ATCC 15444, complete genometype I restriction-modification system, R subunit1e-1067
NC_009338:817854:8251378251378285503414Mycobacterium gilvum PYR-GCK chromosome, complete genometype III restriction enzyme, res subunit7e-1684.3
NC_016887:3286436:3321039332103933244823444Nocardia cyriacigeorgica GUH-2, complete genomerestriction-modification system endonuclease6e-1374.7
NC_006361:2920028:2929350292935029327933444Nocardia farcinica IFM 10152, complete genomeputative restriction-modification system endonuclease4e-1375.1
NC_006361:3047788:3056083305608330575161434Nocardia farcinica IFM 10152, complete genomeputative restriction-modification system endonuclease2e-0962.8
NC_013406:1217385:1238848123884812422013354Paenibacillus sp. Y412MC10 chromosome, complete genometype III restriction protein res subunit3e-37155
NC_007908:1108494:1131262113126211346783417Rhodoferax ferrireducens T118, complete genometype III restriction enzyme, res subunit2e-1065.9
NC_017068:2055500:2059346205934620626783333Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system R subunit3e-24112
NC_015953:3227000:3232508323250832359693462Streptomyces sp. SirexAA-E chromosome, complete genomeType I site-specific deoxyribonuclease2e-0756.6
NC_008346:584305:6103396103396136863348Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system R subunit (endonuclease)4e-36151
NC_019897:3613830:3635423363542336387763354Thermobacillus composti KWC4 chromosome, complete genomehelicase, type I site-specific restriction-modification system restriction subunit4e-34145
NC_019902:1061432:109591610959161096872957Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, restriction subunit R1e-1996.7
NC_015578:3495034:3504553350455335079483396Treponema primitia ZAS-2 chromosome, complete genometype I restriction-modification system R subunit5e-42171
NC_008312:3728329:3736248373624837396073360Trichodesmium erythraeum IMS101, complete genometype III restriction enzyme, res subunit1e-0757