Pre_GI: BLASTP Hits

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Query: NC_013714:1048783:1054281 Bifidobacterium dentium Bd1, complete genome

Start: 1054281, End: 1054919, Length: 639

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008526:343445:355948355948356853906Lactobacillus casei ATCC 334, complete genome3'-5' exonuclease and CRISPR-associated protein cas21e-1273.6
NC_007530:1459412:1473989147398914767932805Bacillus anthracis str. 'Ames Ancestor', complete genomeATP-dependent DNA helicase7e-1167.4
NC_005945:1459357:1473943147394314767472805Bacillus anthracis str. Sterne, complete genomeATP-dependent DNA helicase7e-1167.4
NC_007622:1214629:1218890121889012232064317Staphylococcus aureus RF122, complete genomeDNA polymerase III1e-1376.6
NC_009782:1327340:1331601133160113359174317Staphylococcus aureus subsp. aureus Mu3, complete genomeDNA polymerase III alpha chain PolC-type1e-1376.3
NC_007350:1551457:1558499155849915628154317Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,DNA polymerase III alpha chain PolC-type4e-1374.7
NC_012814:1465738:147026014702601470826567Bifidobacterium animalis subsp. lactis Bl-04, complete genomeDNA polymerase III alpha subunit5e-21100
NC_012806:818592:8185928185928229594368Mycoplasma conjunctivae, complete genomeDNA polymerase III alpha subunit4e-0961.2
NC_012815:1465670:147019214701921470758567Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeDNA polymerase III alpha subunit5e-21100
NC_014387:1175927:1178121117812111827104590Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeDNA polymerase III C PolC12e-1376.3
NC_009488:1165927:118756911875691188237669Orientia tsutsugamushi str. Boryong, complete genomeDNA polymerase III epsilon chain9e-1063.5
NC_008313:2685531:268771026877102688450741Ralstonia eutropha H16 chromosome 1, complete sequenceDNA polymerase III epsilon subunit2e-0756.2
NS_000191:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17, completeDNA polymerase III epsilon subunit2e-1272.4
NC_020419:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeDNA polymerase III epsilon subunit2e-1272.4
NC_014311:1545175:154795115479511548679729Ralstonia solanacearum PSI07 chromosome, complete genomeDNA polymerase III epsilon subunit4e-0755.1
NC_012668:3037345:303774730377473038652906Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA polymerase III epsilon subunit-like 3'-5' exonuclease9e-0960.1
NC_011969:3549000:3561396356139635656974302Bacillus cereus Q1 chromosome, complete genomeDNA polymerase iii polc2e-1789.4
NC_011773:3651963:3664276366427636685774302Bacillus cereus AH820 chromosome, complete genomeDNA polymerase III PolC2e-1789.4
NC_014171:3701051:3713367371336737176684302Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III PolC2e-1789
NC_009698:2367171:2397736239773624020344299Clostridium botulinum A str. Hall chromosome, complete genomeDNA polymerase III PolC3e-1478.6
NC_012581:559182:6048696048696091704302Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA polymerase III PolC2e-1789.4
NC_017208:3816753:3829460382946038337614302Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III PolC2e-1789
NC_009674:2551759:2564124256412425684254302Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeDNA polymerase III PolC2e-1685.9
NC_012658:2584355:2611499261149926157974299Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA polymerase III PolC4e-1581.3
NC_015975:1056731:1056731105673110610804350Lactobacillus ruminis ATCC 27782 chromosome, complete genomeDNA polymerase III PolC2e-0756.2
NC_012659:3617000:3629417362941736337184302Bacillus anthracis str. A0248, complete genomeDNA polymerase III PolC2e-1789.4
NC_009495:2524000:2553368255336825576664299Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA polymerase III PolC3e-1478.6
NC_017294:758992:7723037723037764964194Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA polymerase III PolC3e-0858.5
NC_011658:3603009:3617434361743436217354302Bacillus cereus AH187 chromosome, complete genomeDNA polymerase III PolC2e-1789.4
NC_011725:3821789:3834107383410738384084302Bacillus cereus B4264 chromosome, complete genomeDNA polymerase III PolC2e-1789
NC_009697:2394826:2425391242539124296894299Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA polymerase III PolC3e-1478.6
NC_017353:1699652:1711348171134817156644317Staphylococcus lugdunensis N920143, complete genomeDNA polymerase III PolC-type9e-1580.5
NC_013315:1370000:1372091137209113763894299Clostridium difficile CD196 chromosome, complete genomeDNA polymerase III PolC-type5e-1477.8
NC_017179:1378875:1381865138186513861634299Clostridium difficile BI1, complete genomeDNA polymerase III PolC-type5e-1477.8
NC_002952:1291444:1295705129570513000214317Staphylococcus aureus subsp. aureus MRSA252, complete genomeDNA polymerase III PolC-type1e-1376.3
NC_014727:2036340:205057920505792051475897Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii polc-type1e-1893.6
NC_015760:61345:7446974469788634395Streptococcus salivarius CCHSS3, complete genomeDNA polymerase III polC-type (PolIII)9e-1063.5
NC_012438:1514376:152834415283441528961618Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA polymerase III PolC-type (PolIII)2e-1582.8
NC_007530:3616828:3629517362951736338184302Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA polymerase III subunit alpha2e-1789.4
NC_015589:1899329:1899329189932919036064278Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA polymerase III subunit alpha2e-1685.5
NC_017341:1291583:1295844129584413001604317Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,DNA polymerase III subunit alpha1e-1376.3
NC_015737:2146953:216048921604892161424936Clostridium sp. SY8519, complete genomeDNA polymerase III subunit alpha3e-1168.6
NC_006448:59654:7279172791771854395Streptococcus thermophilus LMG 18311, complete genomeDNA polymerase III subunit alpha4e-1065.1
NC_016628:935420:938432938432938986555Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceDNA polymerase III subunit alpha1e-0963.5
NC_016771:3555506:3569931356993135742324302Bacillus cereus NC7401, complete genomeDNA polymerase III subunit alpha2e-1789.4
NC_006274:3697255:3709943370994337142444302Bacillus cereus E33L, complete genomeDNA polymerase III subunit alpha2e-1789.4
NC_004722:3777907:3790222379022237945294308Bacillus cereus ATCC 14579, complete genomeDNA polymerase III subunit alpha2e-1789
NC_006449:58436:7157471574759684395Streptococcus thermophilus CNRZ1066, complete genomeDNA polymerase III subunit alpha4e-1065.1
NC_014103:3985897:4000185400018540044954311Bacillus megaterium DSM319 chromosome, complete genomeDNA polymerase III subunit alpha1e-1789.7
NC_005957:3638750:3651061365106136553624302Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA polymerase III subunit alpha2e-1789.4
NC_014335:3567931:3580242358024235845434302Bacillus cereus biovar anthracis str. CI chromosome, completeDNA polymerase III subunit alpha2e-1789.4
NC_016779:3579743:3596109359610935990212913Bacillus cereus F837/76 chromosome, complete genomeDNA polymerase III subunit alpha3e-1788.6
NC_003997:3617000:3629390362939036336914302Bacillus anthracis str. Ames, complete genomeDNA polymerase III subunit alpha2e-1789.4
NC_005945:3615623:3630085363008536343864302Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit alpha2e-1789.4
NC_009253:2139379:2156194215619421604744281Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA polymerase III subunit alpha1e-1583.2
NC_017338:1234077:1236038123603812403544317Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeDNA polymerase III subunit alpha1e-1376.3
NC_012778:841934:8669008669008714414542Eubacterium eligens ATCC 27750, complete genomeDNA polymerase III subunit alpha, the Gram-positive type9e-1063.5
NC_015731:2460248:2460248246024824616391392Nitrosomonas sp. Is79A3 chromosome, complete genomeDNA polymerase III subunit epsilon2e-1479
NC_015572:2186394:2188322218832221897221401Methylomonas methanica MC09 chromosome, complete genomeDNA polymerase III subunit epsilon8e-1477
NC_004088:3382148:340481234048123405576765Yersinia pestis KIM, complete genomeDNA polymerase III subunit epsilon2e-0858.9
NC_007508:1221500:122526112252611225995735Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeDNA polymerase III subunit epsilon5e-0651.2
NC_015671:1540860:1558211155821115600791869Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDNA polymerase III subunit epsilon7e-1477.4
NC_015856:1733500:173754217375421738285744Collimonas fungivorans Ter331 chromosome, complete genomeDNA polymerase III subunit epsilon1e-1066.2
NC_005945:3359598:337683333768333377780948Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit epsilon2e-1065.9
NC_017167:1648913:178021217802121781027816Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunit epsilon9e-1063.5
NC_017167:2298962:235386823538682354572705Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunit epsilon1e-0963.5
NC_009952:3596399:363066736306673631359693Dinoroseobacter shibae DFL 12, complete genomeDNA polymerase III subunit epsilon3e-0961.6
NC_016902:3863932:387441338744133875153741Escherichia coli KO11FL chromosome, complete genomeDNA polymerase III subunit epsilon2e-0859.7
NC_009381:1783886:182654518265451827309765Yersinia pestis Pestoides F chromosome, complete genomeDNA polymerase III subunit epsilon2e-0858.9
NC_016445:89500:107938107938108843906Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase III subunit epsilon3e-0858.5
NC_015514:2414617:2418229241822924200911863Cellulomonas fimi ATCC 484 chromosome, complete genomeDNA polymerase III subunit epsilon1e-1582.8
NC_016822:246715:248755248755249486732Shigella sonnei 53G, complete genomeDNA polymerase III subunit epsilon1e-0859.7
NC_015381:1318818:133573613357361336347612Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA polymerase III subunit epsilon3e-1065.5
NC_015731:1731896:174314017431401743883744Nitrosomonas sp. Is79A3 chromosome, complete genomeDNA polymerase III subunit epsilon6e-0857.4
NC_017033:1525132:153944315394431539967525Frateuria aurantia DSM 6220 chromosome, complete genomeDNA polymerase III subunit epsilon family exonuclease5e-1167.8
NC_021182:4829000:4832933483293348372764344Clostridium pasteurianum BC1, complete genomeDNA polymerase III, alpha chain3e-1375.1
NC_019970:1343670:1355741135574113599734233Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA polymerase III, alpha chain3e-1272
NC_004461:921364:9423929423929467204329Staphylococcus epidermidis ATCC 12228, complete genomeDNA polymerase III, alpha chain PolC-type2e-1479
NC_008600:3643905:3660271366027136631892919Bacillus thuringiensis str. Al Hakam, complete genomeDNA polymerase III, alpha subunit3e-1788.6
NC_013515:347671:3919693919693963664398Streptobacillus moniliformis DSM 12112, complete genomeDNA polymerase III, alpha subunit2e-1582.8
NC_014152:1430156:1433347143334714376754329Thermincola sp. JR, complete genomeDNA polymerase III, alpha subunit1e-1273.2
NC_013192:519600:5301375301375345164380Leptotrichia buccalis DSM 1135, complete genomeDNA polymerase III, alpha subunit5e-1270.9
NC_010184:3675424:3688149368814936924504302Bacillus weihenstephanensis KBAB4, complete genomeDNA polymerase III, alpha subunit2e-1789
NC_011898:513835:5162685162685205694302Clostridium cellulolyticum H10, complete genomeDNA polymerase III, alpha subunit1e-1479.7
NC_014727:1292213:1315998131599813203354338Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii, alpha subunit (gram-positive type) (polc)6e-1270.9
NC_003909:3606177:3606177360617736090892913Bacillus cereus ATCC 10987, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-1789
NC_012563:2721658:2727878272787827321764299Clostridium botulinum A2 str. Kyoto, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-1376.3
NC_011772:3787500:3799826379982638041274302Bacillus cereus G9842, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-1789
NC_010520:2585014:2616121261612126204194299Clostridium botulinum A3 str. Loch Maree, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-1479.7
NC_010516:2511035:2541591254159125458894299Clostridium botulinum B1 str. Okra, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-1376.6
NC_006832:825000:828548828548829276729Ehrlichia ruminantium str. Welgevonden, complete genomeDNA polymerase III, epsilon chain3e-1065.5
NC_014722:771483:789311789311790054744Burkholderia rhizoxinica HKI 454, complete genomeDNA polymerase III, epsilon chain9e-0753.5
NC_006831:821000:824448824448825176729Ehrlichia ruminantium str. Gardel, complete genomeDNA polymerase III, epsilon chain2e-1066.2
NC_008149:3251196:327387932738793274643765Yersinia pestis Nepal516, complete genomeDNA polymerase III, epsilon chain2e-0858.9
NC_005295:845000:848673848673849401729Ehrlichia ruminantium str. Welgevonden, complete genomeDNA polymerase III, epsilon subunit1e-1066.2
NC_013205:1548500:155584215558421556564723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit1e-0859.7
CP002185:234719:236750236750237490741Escherichia coli W, complete genomeDNA polymerase III, epsilon subunit2e-0859.7
NC_009901:2915939:293148329314832932211729Shewanella pealeana ATCC 700345, complete genomeDNA polymerase III, epsilon subunit4e-0858.2
NC_008322:2637646:265401326540132654741729Shewanella sp. MR-7, complete genomeDNA polymerase III, epsilon subunit3e-0755.1
NC_015389:2101841:2105296210529621082292934Coriobacterium glomerans PW2 chromosome, complete genomeDNA polymerase III, epsilon subunit3e-1478.6
NC_015588:1965787:1967662196766219693981737Isoptericola variabilis 225 chromosome, complete genomeDNA polymerase III, epsilon subunit1e-1376.6
NC_014363:2035141:4254425472593006Olsenella uli DSM 7084 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-1169.3
NC_013037:6209424:621973662197366220260525Dyadobacter fermentans DSM 18053, complete genomeDNA polymerase III, epsilon subunit5e-1167.8
NC_010531:708049:722835722835723545711Polynucleobacter necessarius STIR1, complete genomeDNA polymerase III, epsilon subunit5e-0857.8
NC_008321:2569315:258567025856702586398729Shewanella sp. MR-4, complete genomeDNA polymerase III, epsilon subunit3e-0755.1
NC_007802:179780:185734185734186429696Jannaschia sp. CCS1, complete genomeDNA polymerase III, epsilon subunit4e-0651.2
NC_015222:2475792:2494021249402124954121392Nitrosomonas sp. AL212 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-1685.9
NC_007517:3430237:345016934501693450825657Geobacter metallireducens GS-15, complete genomeDNA polymerase III, epsilon subunit3e-1582
NC_014210:3742112:3757353375735337591401788Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, epsilon subunit3e-1478.6
NC_014151:2312000:2313921231392123158161896Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA polymerase III, epsilon subunit3e-1375.5
NC_015554:4724245:4724245472424547263772133Alteromonas sp. SN2 chromosome, complete genomeDNA polymerase III, epsilon subunit5e-1064.3
NC_011149:309556:313026313026313766741Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA polymerase III, epsilon subunit5e-0857.8
NC_008577:2818546:284401128440112844739729Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA polymerase III, epsilon subunit1e-0756.6
NC_004347:2668000:268937626893762690104729Shewanella oneidensis MR-1, complete genomeDNA polymerase III, epsilon subunit3e-0755.1
NC_007298:1499344:151363215136321514246615Dechloromonas aromatica RCB, complete genomeDNA polymerase III, epsilon subunit2e-1582.4
NC_009664:3718927:3738654373865437404591806Kineococcus radiotolerans SRS30216, complete genomeDNA polymerase III, epsilon subunit2e-1272.8
NC_015387:942974:942974942974943720747Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeDNA polymerase III, epsilon subunit4e-1168.2
NC_008786:2687688:269100026910002691713714Verminephrobacter eiseniae EF01-2, complete genomeDNA polymerase III, epsilon subunit1e-0963.2
NC_013205:526281:554529554529555251723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit1e-0859.7
CP002516:3863932:387441338744133875153741Escherichia coli KO11, complete genomeDNA polymerase III, epsilon subunit2e-0859.7
NC_013205:1123280:115256811525681153290723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit5e-0857.8
NC_013204:3613824:3619594361959436224942901Eggerthella lenta DSM 2243, complete genomeDNA polymerase III, epsilon subunit2e-0755.8
NC_012472:3661912:3678278367827836811902913Bacillus cereus 03BB102, complete genomeDNA polymerase III, PolC-type3e-1788.6
NC_013595:9994000:100023441000234410002913570Streptosporangium roseum DSM 43021, complete genomeDNA-directed DNA polymerase6e-0650.8
NC_008609:2518993:253566125356612536173513Pelobacter propionicus DSM 2379, complete genomeDNA-directed DNA polymerase6e-0857.4
NC_014836:993448:100898610089861009495510Desulfurispirillum indicum S5 chromosome, complete genomeDNA-directed DNA polymerase2e-1065.9
NC_005085:1269787:132217013221701322889720Chromobacterium violaceum ATCC 12472, complete genomeDNA-directed DNA polymerase, epsilon chain6e-0754.3
NC_014960:1697818:1714903171490317177072805Anaerolinea thermophila UNI-1, complete genomeDnaQ exonuclease/DinG helicase family protein1e-1273.6
NC_002939:1505701:151169815116981512243546Geobacter sulfurreducens PCA, complete genomeexonuclease3e-1065.1
NC_008095:7172047:7172047717204771750132967Myxococcus xanthus DK 1622, complete genomeexonuclease3e-0962
NC_015677:1:204132041321027615Ramlibacter tataouinensis TTB310 chromosome, complete genomeexonuclease protein9e-0960.5
NC_011146:2304475:232637523263752327283909Geobacter bemidjiensis Bem, complete genomeExonuclease RNase T and DNA polymerase III5e-0754.7
NC_013169:1661135:1661135166113516628891755Kytococcus sedentarius DSM 20547, complete genomeexonuclease, DNA polymerase III, epsilon subunit family5e-1271.2
NC_021184:2936244:297147929714792972228750Desulfotomaculum gibsoniae DSM 7213, complete genomeexonuclease, DNA polymerase III, epsilon subunit family6e-1477.4
NC_013165:3146000:3150468315046831534282961Slackia heliotrinireducens DSM 20476, complete genomeexonuclease, DNA polymerase III, epsilon subunit family4e-1064.7
NC_004578:5269194:526919452691945269808615Pseudomonas syringae pv. tomato str. DC3000, complete genomeexonuclease, putative1e-1169.7
NC_012121:897866:9022149022149065274314Staphylococcus carnosus subsp. carnosus TM300, complete genomehomolog of DNA polymerase III, alpha subunit1e-1479.7
NC_020453:896458:9170169170169191782163Agromonas oligotrophica S58 DNA, complete genomehypothetical protein2e-1272.4
NC_013791:1323903:133877913387791339441663Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein6e-1167.4
NC_014366:1663034:167679716767971677699903Gamma proteobacterium HdN1, complete genomehypothetical protein4e-0961.2
NC_009454:1462930:1466970146697014697832814Pelotomaculum thermopropionicum SI, complete genomehypothetical protein3e-0652
NC_010554:2646806:272322427232242724129906Proteus mirabilis HI4320, complete genomeplasmid-related exonuclease2e-0858.9
NC_017511:602000:602234602234603028795Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative DNA polymerase III subunit4e-1374.7
NC_012526:2155947:215999921599992160607609Deinococcus deserti VCD115, complete genomeputative DNA-directed DNA polymerase (DNA polymerase III, epsilon subunit)8e-1270.5
NC_008314:2686851:270009027000902700752663Ralstonia eutropha H16 chromosome 2, complete sequenceputative exonuclease7e-1477.4
NC_008340:2272692:2275718227571822779072190Alkalilimnicola ehrlichei MLHE-1, complete genomeputative PAS/PAC sensor protein6e-1787.4