Pre_GI: BLASTP Hits

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Query: NC_013552:1187299:1201618 Dehalococcoides sp. VS, complete genome

Start: 1201618, End: 1204107, Length: 2490

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020387:1257163:1270970127097012734592490Dehalococcoides mccartyi BTF08, complete genomeDEAD-like helicase01688
NC_020272:84227:9397193971964602490Bacillus amyloliquefaciens IT-45, complete genomeDEAD-like helicase0686
NC_008789:1237969:1246569124656912491482580Halorhodospira halophila SL1, complete genomeDEAD-like helicases-like0681
NC_009921:8147947:8165208816520881677302523Frankia sp. EAN1pec, complete genomehelicase c23e-165582
NC_010617:1467000:1475248147524814777402493Kocuria rhizophila DC2201, complete genomehypothetical protein1e-161571
NC_010397:4909957:4937972493797249405092538Mycobacterium abscessus chromosome Chromosome, complete sequenceConserved hypothetical protein (helicase?)5e-142505
NC_015634:3017564:3025986302598630284992514Bacillus coagulans 2-6 chromosome, complete genomeP-loop containing nucleoside triphosphate hydrolase5e-134479
NC_003037:1245645:1257344125734412598812538Sinorhizobium meliloti 1021 plasmid pSymA, complete sequencehypothetical protein1e-113411
NC_009714:292470:2978292978293003662538Campylobacter hominis ATCC BAA-381, complete genomedead/deah box helicase domain-containing protein3e-113410
NC_014973:595153:6205616205616230532493Geobacter sp. M18 chromosome, complete genometype III restriction protein res subunit5e-43176
NC_011083:1524337:1540739154073915433242586Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,helicase c28e-33142
NC_010162:9502480:9514067951406795168022736Sorangium cellulosum 'So ce 56', complete genomehypothetical protein4e-29130
NC_015422:2858228:2909821290982129124182598Alicycliphilus denitrificans K601 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-28128
NC_014318:6395392:642784864278486428453606Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein1e-24115
NC_017186:6395435:642789164278916428415525Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-24115
NC_017186:6395435:642635064263506426904555Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein6e-21103
NC_014318:6395392:642630764263076426861555Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein6e-21103