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Query: NC_013410:1591500 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1591500, End: 1624900, Length: 33401

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002936:10045701004570102326218693Dehalococcoides ethenogenes 195, complete genome2e-42182BLASTN svgBLASTP svg
NC_009434:3434381*3434381346411529735Pseudomonas stutzeri A1501, complete genome1e-24123BLASTN svgBLASTP svg
NC_002927:960369*96036999159931231Bordetella bronchiseptica RB50, complete genome2e-23119BLASTN svgBLASTP svg
NC_008752:16687716687718811421238Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-21111BLASTN svgBLASTP svg
NC_010655:1808657*1808657182780319147Akkermansia muciniphila ATCC BAA-835, complete genome2e-20109BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome3e-19105BLASTN svgBLASTP svg
NC_010170:44630004463000451176948770Bordetella petrii, complete genome5e-18101BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_010002:4572573*4572573461858346011Delftia acidovorans SPH-1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013124:1439915*1439915146670526791Acidimicrobium ferrooxidans DSM 10331, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013411:2191514*2191514221566224149Geobacillus sp. Y412MC61, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014915:1331459*1331459135560624148Geobacillus sp. Y412MC52 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015635:3860570*3860570389185531286Microlunatus phosphovorus NM-1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013204:989103989103101209922997Eggerthella lenta DSM 2243, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008609:20631320631324672140409Pelobacter propionicus DSM 2379, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008054:1030994*1030994106151930526Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete7e-1177.8BLASTN svgBLASTP svg
NC_014828:20386922038692208731548624Ethanoligenens harbinense YUAN-3 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010831:12240001224000125317729178Chlorobium phaeobacteroides BS1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019897:739577395712749553539Thermobacillus composti KWC4 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008497:1575884*1575884159946023577Lactobacillus brevis ATCC 367, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_021184:1484352*1484352152109936748Desulfotomaculum gibsoniae DSM 7213, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_020207:55931055931058209922790Enterococcus faecium NRRL B-2354, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014218:88211888211890872426607Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011666:2109274*2109274213911129838Methylocella silvestris BL2, complete genome4e-0661.9BLASTN svgBLASTP svg