Pre_GI: BLASTP Hits

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Query: NC_013410:89811:110429 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 110429, End: 111604, Length: 1176

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008687:45967:4803148031490891059Paracoccus denitrificans PD1222 chromosome 2, complete sequencedihydroorotate dehydrogenase4e-24112
NC_010617:1428902:1447312144731214484031092Kocuria rhizophila DC2201, complete genomedihydroorotate dehydrogenase6e-24112
NC_002607:1868371:1872969187296918740181050Halobacterium sp. NRC-1, complete genomedihydroorotate dehydrogenase8e-24111
NC_014729:296103:3001193001193011771059Halogeometricum borinquense DSM 11551 chromosome, complete genomedihydroorotate oxidase a; dihydroorotate oxidase b, catalytic subunit5e-23108
NC_012029:11986:1814718147192291083Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomedihydroorotate dehydrogenase6e-23108
NC_010161:596034:6035236035236046051083Bartonella tribocorum CIP 105476, complete genomedihydroorotate dehydrogenase 29e-23108
NC_017150:255474:2699992699992710721074Acetobacter pasteurianus IFO 3283-01-42C, complete genomedihydroorotate dehydrogenase3e-22106
NC_013158:1659426:1663300166330016643521053Halorhabdus utahensis DSM 12940, complete genomedihydroorotate dehydrogenase4e-22105
NC_016513:1568401:1586533158653315875521020Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completedihydroorotate dehydrogenase 22e-21103
NC_020541:2551539:2576160257616025771971038Rhodanobacter sp. 2APBS1, complete genomedihydroorotate dehydrogenase, subfamily 23e-21103
NC_013967:2760473:2773191277319127742461056Haloferax volcanii DS2 chromosome, complete genomedihydroorotate oxidase3e-21102
NC_014738:1635000:1639252163925216402741023Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,dihydroorotate dehydrogenase1e-20101
NC_008212:61567:6452264522655951074Haloquadratum walsbyi DSM 16790, complete genomedihydroorotate oxidase2e-20100
NC_013416:1246880:1264676126467612656951020Aggregatibacter actinomycetemcomitans D11S-1, complete genomedihydroorotate oxidase1e-20100
NC_014501:5832879:5840574584057458417971224Cyanothece sp. PCC 7822 chromosome, complete genomedihydroorotate dehydrogenase1e-20100
NC_007426:205390:2178622178622189141053Natronomonas pharaonis DSM 2160, complete genomedihydroorotate dehydrogenase4e-2099.4
NC_014643:2056280:2139492213949221405831092Rothia dentocariosa ATCC 17931 chromosome, complete genomedihydroorotate oxidase5e-2099
NC_014323:3669704:3685667368566736867311065Herbaspirillum seropedicae SmR1 chromosome, complete genomedihydroorotate dehydrogenase2e-1997.4
NC_015856:3536441:3551507355150735525771071Collimonas fungivorans Ter331 chromosome, complete genomedihydroorotate dehydrogenase4e-1995.9
NC_010338:426388:4267294267294277931065Caulobacter sp. K31, complete genomeDihydroorotate oxidase5e-1995.9
NC_009715:905134:9253699253699264421074Campylobacter curvus 525.92 chromosome, complete genomedihydroorotate dehydrogenase 26e-1995.5
NC_008705:3377697:3381010338101033820801071Mycobacterium sp. KMS, complete genomedihydroorotate dehydrogenase2e-1893.6
NC_008146:3349415:3352728335272833537981071Mycobacterium sp. MCS, complete genomedihydroorotate dehydrogenase2e-1893.6
NC_009077:3323291:3326604332660433276741071Mycobacterium sp. JLS, complete genomedihydroorotate dehydrogenase2e-1893.6
NC_007508:2072738:2072738207273820737931056Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomedihydroorotate dehydrogenase3e-1893.2
NC_006396:2625962:2629780262978026308321053Haloarcula marismortui ATCC 43049 chromosome I, complete sequencedihydroorotate dehydrogenase5e-1892.4
NC_016745:2229271:2255384225538422563911008Oceanimonas sp. GK1 chromosome, complete genomedihydroorotate dehydrogenase 21e-1790.9
NC_011294:1006630:1024813102481310258231011Salmonella enterica subsp. enterica serovar Enteritidis strdihydroorotate dehydrogenase 22e-1790.1
NC_011205:1107998:1125440112544011264501011Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853dihydroorotate dehydrogenase 22e-1790.1
NC_012913:772641:7899147899147909331020Aggregatibacter aphrophilus NJ8700, complete genomedihydroorotate oxidase3e-1789.7
NC_016002:3077648:3082035308203530830751041Pseudogulbenkiania sp. NH8B, complete genomedihydroorotate dehydrogenase 21e-1688.2
NC_013202:606204:6215376215376225891053Halomicrobium mukohataei DSM 12286, complete genomedihydroorotate dehydrogenase2e-1687.4
NC_014297:1:1669416694177521059Halalkalicoccus jeotgali B3 chromosome, complete genomedihydroorotate dehydrogenase 22e-1687
NC_004344:129798:1526241526241536371014Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,dihydroorotate dehydrogenase2e-1687
NC_017347:2724313:2742435274243527434991065Staphylococcus aureus subsp. aureus T0131 chromosome, completeDihydroorotate dehydrogenase 23e-1686.7
NC_007086:2887875:2961807296180729628621056Xanthomonas campestris pv. campestris str. 8004, complete genomedihydroorotate dehydrogenase3e-1686.3
NC_010688:2850164:2867993286799328690481056Xanthomonas campestris pv. campestris, complete genomehypothetical protein3e-1686.3
NC_015859:1631573:1652218165221816533271110Corynebacterium variabile DSM 44702 chromosome, complete genomedihydroorotate dehydrogenase4e-1685.9
NC_013508:1351447:1358693135869313597031011Edwardsiella tarda EIB202, complete genomedihydroorotate dehydrogenase 28e-1685.1
NC_017030:6297351:6312069631206963131571089Corallococcus coralloides DSM 2259 chromosome, complete genomedihydroorotate dehydrogenase 21e-1584.7
NC_013722:1425588:1425588142558814266431056Xanthomonas albilineans, complete genomeputative dihydroorotate dehydrogenase (dihydroorotate oxidase) protein3e-1583.2
NC_016790:1177349:1211485121148512126001116Corynebacterium diphtheriae VA01 chromosome, complete genomedihydroorotate dehydrogenase 27e-1582
NC_016788:1214026:1244095124409512452101116Corynebacterium diphtheriae HC04 chromosome, complete genomedihydroorotate dehydrogenase 27e-1582
NC_016787:1207488:1234108123410812352231116Corynebacterium diphtheriae HC03 chromosome, complete genomedihydroorotate dehydrogenase 27e-1582
NC_016147:2266419:2266710226671022677651056Pseudoxanthomonas spadix BD-a59 chromosome, complete genomedihydroorotate dehydrogenase 21e-1481.6
NC_016782:1227246:1244683124468312457981116Corynebacterium diphtheriae 241 chromosome, complete genomedihydroorotate dehydrogenase 21e-1481.6
NC_002935:1237585:1270943127094312720341092Corynebacterium diphtheriae NCTC 13129, complete genomedihydroorotate dehydrogenase2e-1480.5
NC_016785:1193471:1224731122473112258461116Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomedihydroorotate dehydrogenase 26e-1479
NC_016801:1255611:1289743128974312908581116Corynebacterium diphtheriae C7 (beta) chromosome, complete genomedihydroorotate dehydrogenase 27e-1478.6
NC_016799:1268706:1299965129996513010801116Corynebacterium diphtheriae 31A chromosome, complete genomedihydroorotate dehydrogenase 21e-1378.2
NC_016800:1243000:1273105127310512741961092Corynebacterium diphtheriae BH8 chromosome, complete genomedihydroorotate dehydrogenase 21e-1377.8
NC_014210:965130:9828779828779840461170Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,dihydroorotate dehydrogenase2e-1377.4
NC_011898:702983:715272715272716195924Clostridium cellulolyticum H10, complete genomedihydroorotate dehydrogenase family protein2e-0860.5