Pre_GI: BLASTP Hits

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Query: NC_013410:3358008:3376300 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3376300, End: 3376899, Length: 600

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015873:1901939:191863819186381919282645Megasphaera elsdenii DSM 20460, complete genomeriboflavin synthase1e-37155
UCMB5137:1834999:183499918349991835646648Bacillus atrophaeus UCMB-5137riboflavin synthase subunit alpha2e-36152
NC_018691:896464:920028920028920690663Alcanivorax dieselolei B5 chromosome, complete genomeRiboflavin synthase, alpha subunit2e-36151
NC_014614:478578:483716483716484393678Clostridium sticklandii, complete genomeriboflavin synthase (alpha subunit)3e-36151
NC_015958:11511:256672566726290624Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeriboflavin synthase subunit alpha8e-36149
NC_017195:2273216:227492422749242275571648Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeriboflavin synthase, alpha subunit9e-36149
NC_014976:403919:406652406652407299648Bacillus subtilis BSn5 chromosome, complete genomeriboflavin synthase subunit alpha2e-35148
NC_016593:2370000:237276523727652373409645Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeriboflavin synthase subunit alpha5e-35147
NC_016802:1256287:130464513046451305253609Corynebacterium diphtheriae HC02 chromosome, complete genomeriboflavin synthase subunit alpha9e-35146
NC_002935:1315019:133005613300561330664609Corynebacterium diphtheriae NCTC 13129, complete genomeriboflavin synthase subunit alpha9e-35146
NC_016785:1270295:128533212853321285940609Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016782:1293452:130374613037461304354609Corynebacterium diphtheriae 241 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016783:1313008:132804513280451328653609Corynebacterium diphtheriae INCA 402 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016786:1293421:130371513037151304323609Corynebacterium diphtheriae HC01 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016787:1276983:129316512931651293773609Corynebacterium diphtheriae HC03 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016788:1286974:130315613031561303764609Corynebacterium diphtheriae HC04 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016789:1334514:134955213495521350160609Corynebacterium diphtheriae PW8 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016790:1259356:127054412705441271152609Corynebacterium diphtheriae VA01 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016799:1343020:135920113592011359809609Corynebacterium diphtheriae 31A chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016800:1317276:133231313323131332921609Corynebacterium diphtheriae BH8 chromosome, complete genomeriboflavin synthase subunit alpha2e-34145
NC_016801:1333860:134887613488761349484609Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeriboflavin synthase subunit alpha1e-34145
NC_015185:592598:605387605387605992606Desulfurobacterium thermolithotrophum DSM 11699 chromosome,riboflavin synthase, alpha subunit6e-33140
NC_010730:180000:194846194846195478633Sulfurihydrogenibium sp. YO3AOP1, complete genomeriboflavin synthase, alpha subunit5e-33140
NC_014727:2010000:202447020244702025084615Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,riboflavin synthase subunit alpha2e-32138
NC_015666:1293500:131148213114821312087606Halopiger xanaduensis SH-6 chromosome, complete genomeriboflavin synthase subunit alpha6e-32137
NC_010610:908452:909632909632910240609Lactobacillus fermentum IFO 3956, complete genomeriboflavin synthase alpha subunit1e-31135
NC_013416:939668:942917942917943531615Aggregatibacter actinomycetemcomitans D11S-1, complete genomeriboflavin synthase, alpha subunit8e-31133
NC_011999:1567818:157346115734611574084624Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein2e-30132
NC_018870:1417851:142474314247431425393651Thermacetogenium phaeum DSM 12270 chromosome, complete genomeriboflavin synthase subunit alpha RibE1e-30132
NC_017171:280762:300408300408301067660Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeriboflavin synthase subunit alpha7e-30130
NC_011586:268927:332815332815333474660Acinetobacter baumannii AB0057 chromosome, complete genomeriboflavin synthase subunit alpha7e-30130
NC_010611:240839:270554270554271213660Acinetobacter baumannii ACICU, complete genomeRiboflavin synthase alpha chain7e-30130
NC_019902:2943719:296349029634902964170681Thioalkalivibrio nitratireducens DSM 14787, complete genomeRiboflavin synthase alpha chain1e-29129
NC_014761:1715377:173233717323371732927591Oceanithermus profundus DSM 14977 chromosome, complete genomeriboflavin synthase, alpha subunit9e-28123
NC_014828:637523:662890662890663528639Ethanoligenens harbinense YUAN-3 chromosome, complete genomeriboflavin synthase, alpha subunit8e-28123
NC_018704:896209:919138919138919758621Amphibacillus xylanus NBRC 15112, complete genomeriboflavin synthase alpha chain6e-28123
NC_016510:1874942:188578018857801886370591Flavobacterium columnare ATCC 49512 chromosome, complete genomeriboflavin synthase subunit alpha2e-27122
NC_007912:4396972:439810943981094398771663Saccharophagus degradans 2-40, complete genomeDrug resistance transporter EmrB/QacA subfamily2e-27121
NC_004193:3325612:334739633473963348022627Oceanobacillus iheyensis HTE831, complete genomeriboflavin synthase subunit alpha3e-27121
NC_014215:2295500:231386623138662314528663Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Riboflavin synthase alpha chain8e-27120
NC_014972:847099:848834848834849487654Desulfobulbus propionicus DSM 2032 chromosome, complete genomeriboflavin synthase subunit alpha6e-27120
NC_015696:105748:105150105150105755606Francisella sp. TX077308 chromosome, complete genomeriboflavin synthase subunit alpha4e-27120
NC_020411:765500:784561784561785181621Hydrogenobaculum sp. HO, complete genomeriboflavin synthase alpha chain1e-26119
NC_015557:765500:784534784534785154621Hydrogenobaculum sp. 3684 chromosome, complete genomeriboflavin synthase, alpha subunit1e-26119
NC_015587:765500:784589784589785209621Hydrogenobaculum sp. SHO chromosome, complete genomeriboflavin synthase, alpha subunit1e-26119
NC_014410:8694:228342283423454621Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,riboflavin synthase, alpha subunit2e-26119
NC_009633:1058000:106651310665131067169657Alkaliphilus metalliredigens QYMF chromosome, complete genomeriboflavin synthase subunit alpha3e-26118
NC_011126:779500:798019798019798639621Hydrogenobaculum sp. Y04AAS1, complete genomeriboflavin synthase, alpha subunit3e-26118
NC_016632:830000:833319833319833957639Serratia symbiotica str. 'Cinara cedri' chromosome, completeriboflavin synthase subunit alpha2e-26118
NC_019970:8938:230602306023680621Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeriboflavin synthase alpha chain4e-26117
NC_013194:634039:652464652464653096633Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeriboflavin synthase, alpha subunit9e-26116
NC_016776:3258939:326302332630233263625603Bacteroides fragilis 638R, complete genomeriboflavin synthase subunit alpha1e-25115
NC_003228:3212500:322561532256153226217603Bacteroides fragilis NCTC 9343, complete genomeriboflavin synthase subunit alpha1e-25115
NC_017080:1981788:200523120052312005950720Phycisphaera mikurensis NBRC 102666, complete genomeriboflavin synthase subunit alpha2e-25115
NC_001263:132288:154966154966155610645Deinococcus radiodurans R1 chromosome 1, complete sequenceriboflavin synthase subunit alpha5e-25114
NC_008340:420126:421267421267421932666Alkalilimnicola ehrlichei MLHE-1, complete genomeriboflavin synthase, alpha subunit4e-25114
NC_014148:3368519:337466733746673375284618Planctomyces limnophilus DSM 3776 chromosome, complete genomeriboflavin synthase, alpha subunit8e-25113
NC_014330:1541874:155231815523181552959642Brachyspira pilosicoli 95/1000 chromosome, complete genomeriboflavin synthase subunit alpha9e-25113
NC_018607:2578433:258499225849922585633642Brachyspira pilosicoli B2904 chromosome, complete genomeriboflavin synthase subunit alpha9e-25113
NC_010718:128423:146705146705147424720Natranaerobius thermophilus JW/NM-WN-LF, complete genomeriboflavin synthase, alpha subunit9e-25113
NC_014657:473479:492499492499493077579Caldicellulosiruptor owensensis OL chromosome, complete genomeriboflavin synthase, alpha subunit1e-24112
NC_007498:1666242:169119316911931691843651Pelobacter carbinolicus DSM 2380, complete genomeriboflavin synthase, alpha subunit2e-24112
NC_016148:951446:955565955565956227663Thermovirga lienii DSM 17291 chromosome, complete genomeriboflavin synthase subunit alpha4e-24111
NC_007651:1726472:174120017412001741829630Burkholderia thailandensis E264 chromosome I, complete sequenceriboflavin synthase, alpha subunit8e-24110
NC_018604:233769:243853243853244494642Brachyspira pilosicoli WesB complete genomeriboflavin synthase subunit alpha7e-24110
NC_019940:203718:222930222930223589660Thioflavicoccus mobilis 8321 chromosome, complete genomeriboflavin synthase subunit alpha5e-24110
NC_003198:1621347:162253716225371623178642Salmonella enterica subsp. enterica serovar Typhi str. CT18,riboflavin synthase subunit alpha1e-23109
NC_011274:1763676:176486617648661765507642Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91riboflavin synthase subunit alpha1e-23109
NC_011294:1723852:172504217250421725683642Salmonella enterica subsp. enterica serovar Enteritidis strriboflavin synthase subunit alpha1e-23109
NC_016831:1236786:126892512689251269566642Salmonella enterica subsp. enterica serovar Gallinarum/pullorumriboflavin synthase subunit alpha1e-23109
NC_010102:1616530:161772016177201618361642Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-23109
NC_003197:1471349:150355215035521504193642Salmonella typhimurium LT2, complete genomeriboflavin synthase subunit alpha1e-23109
NC_011149:1710601:171179117117911712432642Salmonella enterica subsp. enterica serovar Agona str. SL483,riboflavin synthase, alpha subunit1e-23109
NC_011094:1435347:146746614674661468107642Salmonella enterica subsp. enterica serovar Schwarzengrund strriboflavin synthase subunit alpha1e-23109
NC_011205:1852665:185385518538551854496642Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853riboflavin synthase subunit alpha1e-23109
NC_016856:1481325:151352815135281514169642Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sriboflavin synthase subunit alpha1e-23109
NC_016860:1469066:150123915012391501880642Salmonella enterica subsp. enterica serovar Typhimurium strriboflavin synthase subunit alpha1e-23109
NC_016863:1429516:146171914617191462360642Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1riboflavin synthase subunit alpha1e-23109
NC_011080:1470794:150299215029921503633642Salmonella enterica subsp. enterica serovar Newport str. SL254,riboflavin synthase, alpha subunit9e-24109
NC_012125:2360815:236200523620052362646642Salmonella enterica subsp. enterica serovar Paratyphi C strainriboflavin synthase subunit alpha9e-24109
NC_012691:1144715:114979311497931150515723Tolumonas auensis DSM 9187, complete genomeriboflavin synthase, alpha subunit3e-23108
NC_006511:1506915:150810515081051508746642Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCriboflavin synthase subunit alpha3e-23108
NC_011147:1502096:150328615032861503927642Salmonella enterica subsp. enterica serovar Paratyphi A strriboflavin synthase subunit alpha3e-23108
NC_010067:1507823:151257515125751513216642Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-23108
NC_013282:2026083:206820720682072068857651Cronobacter turicensis, complete genomeRiboflavin synthase alpha chain4e-23107
NC_009778:1956225:196145219614521962102651Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-23107
NC_020260:1993344:199842819984281999078651Cronobacter sakazakii Sp291, complete genomeriboflavin synthase subunit alpha6e-23107
NC_014935:1834569:183963318396331840253621Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeriboflavin synthase, alpha subunit1e-22106
NC_005139:1784000:178433417843341784954621Vibrio vulnificus YJ016 chromosome I, complete sequenceriboflavin synthase subunit alpha2e-22105
NC_011666:2259447:228097322809732281596624Methylocella silvestris BL2, complete genomeriboflavin synthase, alpha subunit2e-21102
NC_007510:973828:988305988305988940636Burkholderia sp. 383 chromosome 1, complete sequenceriboflavin synthase subunit alpha1e-21102
NC_006624:324267:351607351607352161555Thermococcus kodakarensis KOD1, complete genomeriboflavin synthase subunit alpha1e-21102
NC_014836:1180454:119788511978851198553669Desulfurispirillum indicum S5 chromosome, complete genomeriboflavin synthase subunit alpha3e-21101
NC_014643:1986440:2011946201194620133401395Rothia dentocariosa ATCC 17931 chromosome, complete genome3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II8e-21100
NC_008781:3056407:307203330720333072692660Polaromonas naphthalenivorans CJ2, complete genomeriboflavin synthase, alpha subunit1e-2099.4
NC_012856:737170:740742740742741395654Ralstonia pickettii 12D chromosome 1, complete genomeriboflavin synthase, alpha subunit2e-2098.6
NC_010682:701912:704256704256704909654Ralstonia pickettii 12J chromosome 1, complete sequenceriboflavin synthase, alpha subunit2e-2098.6
NC_007797:107950:109222109222109833612Anaplasma phagocytophilum HZ, complete genomeriboflavin synthase, alpha subunit3e-2098.2
NC_002620:803696:817813817813818409597Chlamydia muridarum Nigg, complete genomeriboflavin synthase subunit alpha4e-2097.8
NC_011027:1427343:143016914301691430828660Chlorobaculum parvum NCIB 8327, complete genomeriboflavin synthase, alpha subunit5e-2097.4
NC_014311:2733897:275438727543872755040654Ralstonia solanacearum PSI07 chromosome, complete genomeriboflavin synthase (alpha chain)2e-1995.5
NC_013158:2046185:204794820479482048583636Halorhabdus utahensis DSM 12940, complete genomeriboflavin synthase, alpha subunit4e-1994.7
NC_010280:769639:782600782600783199600Chlamydia trachomatis L2b/UCH-1/proctitis, complete genomeriboflavin synthase alpha chain5e-1994.4
NC_010287:769600:782561782561783160600Chlamydia trachomatis 434/Bu, complete genomeriboflavin synthase alpha chain5e-1994.4
NC_015744:769907:782270782270782869600Chlamydia trachomatis L2c chromosome, complete genomeriboflavin synthase, alpha subunit5e-1994.4
NC_017431:451551:464512464512465111600Chlamydia trachomatis E/11023 chromosome, complete genomeriboflavin synthase subunit alpha5e-1994.4
NC_017439:451535:464496464496465095600Chlamydia trachomatis E/150 chromosome, complete genomeriboflavin synthase subunit alpha5e-1994.4
NC_012026:75812:967119671197328618Anaplasma marginale str. Florida, complete genomeriboflavin synthase alpha chain (ribE)8e-1890.1
NC_004545:96422:118530118530119168639Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeriboflavin synthase subunit alpha1e-1789.7
NC_011369:1135592:119155911915591192170612Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeriboflavin synthase subunit alpha4e-1787.8
NC_014497:1:101581015810784627Candidatus Zinderia insecticola CARI chromosome, complete genomeputative riboflavin synthase subunit alpha1e-0652.8